RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 OR2T3Q8NH03 318 aa11.02□□□□□ -0.65
PROM1-207ENST00000508167 RFWD2Q8NHY2 731 aa11.02□□□□□ -0.65
PROM1-207ENST00000508167 ARRDC2Q8TBH0 407 aa11.02□□□□□ -0.65
PROM1-207ENST00000508167 OSBPL1AQ9BXW6 950 aa11.02□□□□□ -0.65
PROM1-207ENST00000508167 CASS4Q9NQ75 786 aa11.02□□□□□ -0.65
PROM1-207ENST00000508167 ARIH1Q9Y4X5 557 aaPredicted RBP11.02□□□□□ -0.65
PROM1-207ENST00000508167 GOLGA8RI6L899 631 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 AP3B1O00203 1094 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 MID1O15344 667 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 HLA-DPA1P20036 260 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 GMPRP36959 345 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 KIR2DL1P43626 348 aaPredicted RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 CDK16Q00536 496 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 SATB1Q01826 763 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 ZKSCAN8Q15776 578 aaPredicted RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 CST6Q15828 149 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TMEM151AQ8N4L1 468 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 PPHLN1Q8NEY8 458 aaKnown RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 SLC7A6OSQ96CW6 309 aaPredicted RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 MRRFQ96E11 262 aaKnown RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 SLC6A17Q9H1V8 727 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 ACTR5Q9H9F9 607 aaPredicted RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 ZC3H7BQ9UGR2 993 aaKnown RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 EYSQ5T1H1 3165 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 A0A1W2PP55 124 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 STX7O15400 261 aaKnown RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 SNNO75324 88 aaPredicted RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 PDHA1P08559 390 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 VIMP08670 466 aaKnown RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 HNRNPLP14866 589 aaKnown RBP eCLIP11.01□□□□□ -0.656e-6■□□□□ 11.3
PROM1-207ENST00000508167 MGAT1P26572 445 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 HNRNPH1P31943 449 aaKnown RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 ZNF805Q5CZA5 627 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 RALGPS1Q5JS13 557 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 DENND5AQ6IQ26 1287 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 PHTF2Q8N3S3 785 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 KDM1BQ8NB78 822 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 OR6P1Q8NGX9 317 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TUBGCP5Q96RT8 1024 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TPSD1Q9BZJ3 242 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 VPS11Q9H270 941 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 SYBUQ9NX95 663 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 MMP17Q9ULZ9 603 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TRIM33Q9UPN9 1127 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 ARL2BPQ9Y2Y0 163 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 CAPN7Q9Y6W3 813 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 HELZP42694 1942 aaKnown RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3DA0A087WVF3 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3IA0A087WXS9 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3EA0A087X179 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3KA0A087X1G2 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 C1orf232A0A0U1RR37 186 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3FA6NER0 549 aaPredicted RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3LB9A6J9 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 FGF1P05230 155 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 ALPIP09923 528 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3HP0C7X1 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 CHRNB1P11230 501 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 PHBP35232 272 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 CXCL12P48061 93 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 CRY1Q16526 586 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 C9orf64Q5T6V5 341 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3GQ6DHY5 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3CQ6IPX1 549 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 KIAA1211LQ6NV74 962 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 GLT6D1Q7Z4J2 308 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TMEM135Q86UB9 458 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 TBC1D3Q8IZP1 549 aaPredicted RBP11.01□□□□□ -0.65
PROM1-207ENST00000508167 GSDMBQ8TAX9 411 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 FATE1Q969F0 183 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 CCDC77Q9BR77 488 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 MYLK2Q9H1R3 596 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 PLLPQ9Y342 182 aa11.01□□□□□ -0.65
PROM1-207ENST00000508167 XIRP2A4UGR9 3374 aa11□□□□□ -0.65
PROM1-207ENST00000508167 C2orf81A6NN90 581 aa11□□□□□ -0.65
PROM1-207ENST00000508167 C16orf96A6NNT2 1141 aa11□□□□□ -0.65
PROM1-207ENST00000508167 PDGFBP01127 241 aaPredicted RBP11□□□□□ -0.65
PROM1-207ENST00000508167 CYP2A6P11509 494 aaPredicted RBP11□□□□□ -0.65
PROM1-207ENST00000508167 KCNJ2P63252 427 aa11□□□□□ -0.65
PROM1-207ENST00000508167 PRAMEP78395 509 aa11□□□□□ -0.65
PROM1-207ENST00000508167 CCINQ13939 588 aa11□□□□□ -0.65
PROM1-207ENST00000508167 CERCAMQ5T4B2 595 aa11□□□□□ -0.65
PROM1-207ENST00000508167 BRAT1Q6PJG6 821 aa11□□□□□ -0.65
PROM1-207ENST00000508167 SYNPOQ8N3V7 929 aa11□□□□□ -0.65
PROM1-207ENST00000508167 ACVR1CQ8NER5 493 aa11□□□□□ -0.65
PROM1-207ENST00000508167 SNX19Q92543 992 aa11□□□□□ -0.65
PROM1-207ENST00000508167 EDAQ92838 391 aa11□□□□□ -0.65
PROM1-207ENST00000508167 SKA1Q96BD8 255 aa11□□□□□ -0.65
PROM1-207ENST00000508167 LRIG1Q96JA1 1093 aa11□□□□□ -0.65
PROM1-207ENST00000508167 FEM1CQ96JP0 617 aa11□□□□□ -0.65
PROM1-207ENST00000508167 ZNF641Q96N77 438 aaPredicted RBP11□□□□□ -0.65
PROM1-207ENST00000508167 SMC6Q96SB8 1091 aa11□□□□□ -0.65
PROM1-207ENST00000508167 WRAP53Q9BUR4 548 aaKnown RBP11□□□□□ -0.65
PROM1-207ENST00000508167 TDRD1Q9BXT4 1180 aaKnown RBP11□□□□□ -0.65
PROM1-207ENST00000508167 IL1RAPL1Q9NZN1 696 aa11□□□□□ -0.65
PROM1-207ENST00000508167 PKP3Q9Y446 797 aa11□□□□□ -0.65
PROM1-207ENST00000508167 UNC80Q8N2C7 3258 aa11□□□□□ -0.65
PROM1-207ENST00000508167 SDR42E2A6NKP2 422 aa11□□□□□ -0.65
PROM1-207ENST00000508167 F7P08709 466 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms