RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 SCML4Q8N228 414 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 HIPK4Q8NE63 616 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 OR14C36Q8NHC7 312 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 JAKMIP2Q96AA8 810 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 FAM131CQ96AQ9 280 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 VCPIP1Q96JH7 1222 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 SLC46A1Q96NT5 459 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 SPAG5Q96R06 1193 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 CCNL2Q96S94 520 aaPredicted RBP6.9□□□□□ -1.3
NR1I3-224ENST00000507215 C7orf25Q9BPX7 421 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 TRIM62Q9BVG3 475 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 KRTAP9-4Q9BYQ2 154 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 SDCBP2Q9H190 292 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 NEUROG2Q9H2A3 272 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 MS4A5Q9H3V2 200 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 ABCC13Q9NSE7 274 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 STARD5Q9NSY2 213 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 CLEC4EQ9ULY5 219 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 FRMD4BQ9Y2L6 1034 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 SPO11Q9Y5K1 396 aa6.9□□□□□ -1.3
NR1I3-224ENST00000507215 DOPEY2Q9Y3R5 2298 aa6.9□□□□□ -1.31
NR1I3-224ENST00000507215 UNC79Q9P2D8 2635 aa6.9□□□□□ -1.31
NR1I3-224ENST00000507215 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.31
NR1I3-224ENST00000507215 NOTCH2Q04721 2471 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 FLNCQ14315 2725 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 LRRIQ3A6PVS8 624 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 CLIC2O15247 247 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 PLRG1O43660 514 aaKnown RBP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 FBXO21O94952 628 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ITGA2BP08514 1039 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 INHBBP09529 407 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 DGKAP23743 735 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 SCNN1BP51168 640 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 TKTL1P51854 596 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 HNRNPKP61978 463 aaKnown RBP eCLIP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ECT2LQ008S8 904 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 MTA1Q13330 715 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 KCNJ12Q14500 433 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 SLC39A14Q15043 492 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 STILQ15468 1287 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ISXQ2M1V0 245 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ARL13BQ3SXY8 428 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 PRAMEF14Q5SWL7 426 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 C9orf64Q5T6V5 341 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 KANK2Q63ZY3 851 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ARHGAP17Q68EM7 881 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 MSANTD2Q6P1R3 559 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 RBM44Q6ZP01 1051 aaKnown RBP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 INTS8Q75QN2 995 aaKnown RBP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 PIGZQ86VD9 579 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 MMAAQ8IVH4 418 aaKnown RBP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ANKRD52Q8NB46 1076 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 WDR36Q8NI36 951 aaKnown RBP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 MAPK15Q8TD08 544 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 IRGQQ8WZA9 623 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 NAT6Q93015 286 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 P2RY11Q96G91 374 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 NAF1Q96HR8 494 aaKnown RBP6.89□□□□□ -1.31
NR1I3-224ENST00000507215 TMX3Q96JJ7 454 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 SEMA4CQ9C0C4 833 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ZMAT4Q9H898 229 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 L2HGDHQ9H9P8 463 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 LRRC4Q9HBW1 653 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 CNGB3Q9NQW8 809 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 ACSS2Q9NR19 701 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 HESX1Q9UBX0 185 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 HMGXB4Q9UGU5 601 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 CYTH4Q9UIA0 394 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 KIAA1257Q9ULG3 409 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 CEP83Q9Y592 693 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 PCDHB1Q9Y5F3 818 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 PCDHGA7Q9Y5G6 932 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 CSNK1G3Q9Y6M4 447 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 DUSP10Q9Y6W6 482 aa6.89□□□□□ -1.31
NR1I3-224ENST00000507215 CDRT15L2A8MXV6 281 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 TRIM38O00635 465 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 PDXKO00764 312 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 XPO1O14980 1071 aaKnown RBP6.88□□□□□ -1.31
NR1I3-224ENST00000507215 SCAMP1O15126 338 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 TBL1XO60907 577 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 VNN1O95497 513 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 IL1BP01584 269 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 IGLV3-27P01718 113 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 SETSIPP0DME0 302 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 GP1BBP13224 206 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 BPIP17213 487 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 AKT2P31751 481 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 GTF2H1P32780 548 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 CSKP41240 450 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 PSMD8P48556 350 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 CLDN6P56747 220 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 YWHAEP62258 255 aaKnown RBP6.88□□□□□ -1.31
NR1I3-224ENST00000507215 NFATC3Q12968 1075 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 FBLN7Q53RD9 439 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 SPATS2Q86XZ4 545 aaKnown RBP6.88□□□□□ -1.31
NR1I3-224ENST00000507215 NELFCDQ8IXH7 590 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 SIX6OS1Q8N1H7 587 aa6.88□□□□□ -1.31
NR1I3-224ENST00000507215 SLC25A45Q8N413 288 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms