RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FLRT2O43155 660 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PCDHGA12O60330 932 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PMPCBO75439 489 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ANXA9O76027 345 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 HEXIM1O94992 359 aaKnown RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 MT-CYBP00156 380 aaPredicted RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 PRLP01236 227 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 EPOP01588 193 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ITGAVP06756 1048 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 MMP2P08253 660 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ALPIP09923 528 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 GOLGA6DP0CG33 693 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 CEACAM1P13688 526 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 NFKB1P19838 968 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 CSRP1P21291 193 aaKnown RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 ACTN2P35609 894 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 THOP1P52888 689 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 GEMP55040 296 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PFN3P60673 137 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 RALGDSQ12967 914 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 CLN3Q13286 438 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 KLF1Q13351 362 aaPredicted RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 MPP3Q13368 585 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PDE1CQ14123 709 aaPredicted RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 IHHQ14623 411 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 INPP5AQ14642 412 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PCSK7Q16549 785 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 WSCD2Q2TBF2 565 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 HS1BP3Q53T59 392 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ZNF569Q5MCW4 686 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ANKRD20A2Q5SQ80 823 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PRAMEF14Q5SWL7 426 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ANKRD20A1Q5TYW2 823 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ANKRD20A3Q5VUR7 823 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 DENND2CQ68D51 928 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 CRTC1Q6UUV9 634 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 DBX2Q6ZNG2 339 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 GCNT7Q6ZNI0 430 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 SPATS2Q86XZ4 545 aaKnown RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 REXO1L1PQ8IX06 675 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 NRSN1Q8IZ57 195 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 CBARPQ8N350 705 aaPredicted RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 LPCAT1Q8NF37 534 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 OR13H1Q8NG92 308 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 OR2I1PQ8NGU4 316 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ATL2Q8NHH9 583 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 SPATA22Q8NHS9 363 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 RHBDD1Q8TEB9 315 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 BTN2A2Q8WVV5 523 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 TADA1Q96BN2 335 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 PBKQ96KB5 322 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 MCCC1Q96RQ3 725 aaPredicted RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 FAM118BQ9BPY3 351 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 HERPUD2Q9BSE4 406 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 APOOQ9BUR5 198 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 KCNF1Q9H3M0 494 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 C10orf88Q9H8K7 445 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 USP29Q9HBJ7 922 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 MAGEE1Q9HCI5 957 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 MBNL1Q9NR56 388 aaKnown RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 HOMER3Q9NSC5 361 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 TRMT1Q9NXH9 659 aaKnown RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 GOLGA6AQ9NYA3 693 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ZNF148Q9UQR1 794 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 ZKSCAN5Q9Y2L8 839 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 NYNRINQ9P2P1 1898 aaKnown RBP7.27□□□□□ -1.25
GYPB-206ENST00000506516 NUP205Q92621 2012 aa7.27□□□□□ -1.25
GYPB-206ENST00000506516 C1orf232A0A0U1RR37 186 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 LOC285095A0A1B0GVY8 99 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 DCDC2BA2VCK2 349 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 RGSL1A5PLK6 1076 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 NEMP2A6NFY4 417 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 CAPN8A6NHC0 703 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 H3BM21 787 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 MEN1O00255 615 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 CACNB4O00305 520 aaPredicted RBP7.26□□□□□ -1.25
GYPB-206ENST00000506516 LIASO43766 372 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 SH3BP5O60239 455 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 CEP104O60308 925 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 GCATO75600 419 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 CLDN7O95471 211 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 NDST3O95803 873 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 FGGP02679 453 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 PCCBP05166 539 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 PYGLP06737 847 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 HOXC4P09017 264 aaPredicted RBP7.26□□□□□ -1.25
GYPB-206ENST00000506516 CD59P13987 128 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 TSHRP16473 764 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 LHCGRP22888 699 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 KELP23276 732 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 CD68P34810 354 aaPredicted RBP7.26□□□□□ -1.25
GYPB-206ENST00000506516 GRK6P43250 576 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 BLKP51451 505 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 WNT3AP56704 352 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 HNRNPKP61978 463 aaKnown RBP eCLIP7.26□□□□□ -1.25
GYPB-206ENST00000506516 PTSQ03393 145 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 BNIP3Q12983 259 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 MTM1Q13496 603 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 GALNT3Q14435 633 aa7.26□□□□□ -1.25
GYPB-206ENST00000506516 IRF4Q15306 451 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms