RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ACOT8O14734 319 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 GAGE7O76087 117 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 MLYCDO95822 493 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 GAGE12FP0CL80 117 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 GAGE12GP0CL81 117 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 GAGE12IP0CL82 117 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 TGFB3P10600 412 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 KRT10P13645 584 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 BSGP35613 385 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 CLCN3P51790 818 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 RRP1P56182 461 aaKnown RBP3.88□□□□□ -1.79
CHD1-203ENST00000505657 GAGE1Q13065 139 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 GAGE4Q13068 117 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 MED22Q15528 200 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 KIF19Q2TAC6 998 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 CDONQ4KMG0 1287 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 TMTC3Q6ZXV5 915 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 PXKQ7Z7A4 578 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 CPLX4Q7Z7G2 160 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 SATL1Q86VE3 508 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 DCP1BQ8IZD4 617 aaKnown RBP3.88□□□□□ -1.79
CHD1-203ENST00000505657 ZNF441Q8N8Z8 693 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 OR14L1PQ8NHC6 308 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 SPATA20Q8TB22 786 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 HMGCLL1Q8TB92 370 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 ETNPPLQ8TBG4 499 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 DUSP19Q8WTR2 217 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 UCMAQ8WVF2 138 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 TANKQ92844 425 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 RHBDF1Q96CC6 855 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 MTBPQ96DY7 904 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 GRAMD2BQ96HH9 432 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 OR1F2PQ96R84 312 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 TMEM47Q9BQJ4 181 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 IFIH1Q9BYX4 1025 aaKnown RBP3.88□□□□□ -1.79
CHD1-203ENST00000505657 SLC28A3Q9HAS3 691 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 LRRC4Q9HBW1 653 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 FBRSL1Q9HCM7 1045 aaKnown RBP3.88□□□□□ -1.79
CHD1-203ENST00000505657 SMARCAL1Q9NZC9 954 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 ZNF224Q9NZL3 707 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 ORC3Q9UBD5 711 aaPredicted RBP3.88□□□□□ -1.79
CHD1-203ENST00000505657 SIX4Q9UIU6 781 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 ATXN2Q99700 1313 aaKnown RBP3.88□□□□□ -1.79
CHD1-203ENST00000505657 FAM237BA0A1B0GVD1 139 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 RFPL2O75678 378 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 SRCP12931 536 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 PEX5P50542 639 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 HNRNPH2P55795 449 aaKnown RBP3.87□□□□□ -1.79
CHD1-203ENST00000505657 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
CHD1-203ENST00000505657 ERVFC1-1P60608 527 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 OLIG2Q13516 323 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 KRT32Q14532 448 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 CCNG2Q16589 344 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 CTF1Q16619 201 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 DPCR1Q3MIW9 517 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 GGNBP1Q5YKI7 109 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 TTI2Q6NXR4 508 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 FAM180BQ6P0A1 224 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 DPPA4Q7L190 304 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 ODF3L1Q8IXM7 274 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 ZNF34Q8IZ26 560 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 WFIKKN2Q8TEU8 576 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 BICD1Q96G01 975 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 PKP4Q99569 1192 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 CSTL1Q9H114 145 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 PDCL3Q9H2J4 239 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 ZNF556Q9HAH1 456 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 OLA1Q9NTK5 396 aaKnown RBP3.87□□□□□ -1.79
CHD1-203ENST00000505657 ZNF69Q9UC07 566 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 LIMA1Q9UHB6 759 aaKnown RBP3.87□□□□□ -1.79
CHD1-203ENST00000505657 PADI3Q9ULW8 664 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 KCNE2Q9Y6J6 123 aa3.87□□□□□ -1.79
CHD1-203ENST00000505657 TAF1P21675 1872 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 SAA2-SAA4A0A096LPE2 208 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 C1orf226A1L170 272 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 TULP2O00295 520 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 EGFP01133 1207 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 DAOP14920 347 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 ZNF182P17025 639 aaPredicted RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 BDKRB2P30411 391 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 MAPK4P31152 587 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 MAN1A1P33908 653 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 SLC20A2Q08357 652 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 ILF3Q12906 894 aaKnown RBP eCLIP3.86□□□□□ -1.798e-10■■■■■ 33.1
CHD1-203ENST00000505657 FOXD4Q12950 439 aaPredicted RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 CSTF3Q12996 717 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 ZBTB17Q13105 803 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 DDX10Q13206 875 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 TNFAIP1Q13829 316 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 GPATCH4Q5T3I0 446 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 SNX30Q5VWJ9 437 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 HAUS3Q68CZ6 603 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 RGMBQ6NW40 437 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 METTL2BQ6P1Q9 378 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 DUS1LQ6P1R4 473 aaKnown RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 KCTD18Q6PI47 426 aaPredicted RBP3.86□□□□□ -1.79
CHD1-203ENST00000505657 SPSB3Q6PJ21 355 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 DSTYKQ6XUX3 929 aa3.86□□□□□ -1.79
CHD1-203ENST00000505657 CCNI2Q6ZMN8 369 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms