RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LINC01565O15544 149 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 NKX2-2O95096 273 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 NDUFB4O95168 129 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 PLGP00747 810 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 LCATP04180 440 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 MMP2P08253 660 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 PLA2G2AP14555 144 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 HOXB2P14652 356 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 NAGAP17050 411 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ALOX12P18054 663 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CDH2P19022 906 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 TM4SF1P30408 202 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 HOXD13P35453 343 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 PIGAP37287 484 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 HADHAP40939 763 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 KCNJ4P48050 445 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ADORA2A-AS1P86434 159 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 NUCB1Q02818 461 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 NIPAL4Q0D2K0 466 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ST3GAL1Q11201 340 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 NAE1Q13564 534 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CTTNQ14247 550 aaKnown RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 HNF4GQ14541 408 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CRYMQ14894 314 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 TOMM20Q15388 145 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 SHBQ15464 509 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CCDC96Q2M329 555 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 C2orf68Q2NKX9 166 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CXorf66Q5JRM2 361 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 DNTTIP2Q5QJE6 756 aaKnown RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 FNBP1LQ5T0N5 605 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 QSOX2Q6ZRP7 698 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 KRT77Q7Z794 578 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZNF329Q86UD4 541 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CCDC13Q8IYE1 715 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 SCCPDHQ8NBX0 429 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 BEST2Q8NFU1 509 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ARRDC2Q8TBH0 407 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 POMGNT1Q8WZA1 660 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 TRIB2Q92519 343 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZKSCAN4Q969J2 545 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLITRK1Q96PX8 696 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 C1QTNF5Q9BXJ0 243 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 RBM38Q9H0Z9 239 aaKnown RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 SH2D4AQ9H788 454 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 SYNCQ9H7C4 482 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CLK4Q9HAZ1 481 aaKnown RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 PLAC1Q9HBJ0 212 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 OR6C3Q9NZP0 311 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ABI3Q9P2A4 366 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 TBC1D29Q9UFV1 150 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 VPS28Q9UK41 221 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZNF215Q9UL58 517 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 PCDHA7Q9UN72 937 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 INSL5Q9Y5Q6 135 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 PTGDR2Q9Y5Y4 395 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 CEPT1Q9Y6K0 416 aa2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 RSF1Q96T23 1441 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P35-201ENST00000503360 A0A1B0GVT2 93 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 A0A1W2PRQ8 180 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 FRMD3A2A2Y4 597 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 TMEM202A6NGA9 273 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 BTBD18B2RXH4 712 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 INAFM1C9JVW0 142 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 J3KR12 359 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 VWA5AO00534 786 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 VILLO15195 856 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 ASAP2O43150 1006 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 RGS14O43566 566 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 SPRY3O43610 288 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLC25A12O75746 678 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZNF182P17025 639 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 CALRP27797 417 aaKnown RBP2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 CHATP28329 748 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 RFX2P48378 723 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 PRAMEP78395 509 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 MC1RQ01726 317 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 CREB5Q02930 508 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 LTBQ06643 244 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 GPS2Q13227 327 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 CUL4AQ13619 759 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 NEDD9Q14511 834 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 USP41Q3LFD5 358 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 MMEL1Q495T6 779 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 RILPL1Q5EBL4 403 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 FSCBQ5H9T9 825 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 C6orf141Q5SZD1 244 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 GKAP1Q5VSY0 366 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 TMEM154Q6P9G4 183 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 SARM1Q6SZW1 724 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 CHST9Q7L1S5 443 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 LINGO2Q7L985 606 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 WDR63Q8IWG1 891 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 AGBL3Q8NEM8 1001 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 OR14L1PQ8NHC6 308 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 NUDCD2Q8WVJ2 157 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 ARHGEF26Q96DR7 871 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLC41A2Q96JW4 573 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 C1orf74Q96LT6 269 aa2.48□□□□□ -2.01
HMGB1P35-201ENST00000503360 TMEM68Q96MH6 324 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms