RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-209	ENST00000497871	FRMD8	Q9BZ67	464 aa	Predicted RBP	18.21	■□□□□ 0.51
ATPAF2-209	ENST00000497871	B3GNT4	Q9C0J1	378 aa		18.21	■□□□□ 0.51
ATPAF2-209	ENST00000497871	SEMA6C	Q9H3T2	930 aa		18.21	■□□□□ 0.51
ATPAF2-209	ENST00000497871	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
ATPAF2-209	ENST00000497871	TAAR2	Q9P1P5	351 aa		18.21	■□□□□ 0.51
ATPAF2-209	ENST00000497871	PPIL1	Q9Y3C6	166 aa		18.21	■□□□□ 0.51
ATPAF2-209	ENST00000497871	LRP4	O75096	1905 aa		18.21	■□□□□ 0.51
ATPAF2-209	ENST00000497871	PRAMEF33	A0A0G2JMD5	474 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871		A0A1B0GTH6	734 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	RHPN2P1	A8MT19	583 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PRAMEF10	O60809	474 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PGLS	O95336	258 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TCF4	P15884	667 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	LHCGR	P22888	699 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SERPINB6	P35237	376 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	MMP13	P45452	471 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	OR1D5	P58170	312 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	MAX	P61244	160 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	DPT	Q07507	201 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	NR1D2	Q14995	579 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PHF19	Q5T6S3	580 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ARMC12	Q5T9G4	340 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871		Q6ZVL8	140 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	LRRC49	Q8IUZ0	686 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	NDUFAF2	Q8N183	169 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ATPAF2	Q8N5M1	289 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TEKT4	Q8WW24	435 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	USP7	Q93009	1102 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	RDH14	Q9HBH5	336 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	AKAP7	Q9P0M2	348 aa	Predicted RBP	18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SUFU	Q9UMX1	484 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SLC17A4	Q9Y2C5	497 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PCDHB11	Q9Y5F2	797 aa		18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SETX	Q7Z333	2677 aa	Known RBP	18.2	■□□□□ 0.5
ATPAF2-209	ENST00000497871	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ECEL1	O95672	775 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	KRT10	P13645	584 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	CD82	P27701	267 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ALDH4A1	P30038	563 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ETV5	P41161	510 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	GPR3	P46089	330 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	GNPDA1	P46926	289 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	MAPK10	P53779	464 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	MAZ	P56270	477 aa	Known RBP	18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	NR1I3	Q14994	352 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	AMZ1	Q400G9	498 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	MAP9	Q49MG5	647 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	FIGN	Q5HY92	759 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TMEM164	Q5U3C3	297 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	RAET1G	Q6H3X3	334 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	USP45	Q70EL2	814 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TECPR1	Q7Z6L1	1165 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	NLRP8	Q86W28	1048 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	DTX1	Q86Y01	620 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PIH1D2	Q8WWB5	315 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PIEZO2	Q9H5I5	2752 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SUDS3	Q9H7L9	328 aa	Predicted RBP	18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PCDH18	Q9HCL0	1135 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TMEM63C	Q9P1W3	806 aa		18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	BZW2	Q9Y6E2	419 aa	Known RBP	18.19	■□□□□ 0.5
ATPAF2-209	ENST00000497871	C9orf172	C9J069	976 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	AGRP	O00253	132 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ITGB2	P05107	769 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	IVL	P07476	585 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	AK4	P27144	223 aa	Predicted RBP	18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	CD1C	P29017	333 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	POLD2	P49005	469 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	CTBS	Q01459	385 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	BIRC2	Q13490	618 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	C16orf72	Q14CZ0	275 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	LINC00303	Q3SY05	128 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	MANEA	Q5SRI9	462 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TXNRD3NB	Q6F5E7	133 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SLC30A9	Q6PML9	568 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ZNF574	Q6ZN55	896 aa	Predicted RBP	18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TSPAN33	Q86UF1	283 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ZFAND4	Q86XD8	727 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	TEX26	Q8N6G2	289 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	NIPA2	Q8N8Q9	360 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PTCD2	Q8WV60	388 aa	Known RBP	18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SCARF2	Q96GP6	870 aa	Predicted RBP	18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	FOXJ2	Q9P0K8	574 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	IP6K2	Q9UHH9	426 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ST14	Q9Y5Y6	855 aa		18.18	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ASH1L	Q9NR48	2969 aa	Known RBP	18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	GOLGA6C	A6NDK9	693 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	GOLGA6B	A6NDN3	693 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	HGS	O14964	777 aa	Predicted RBP	18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	FZD6	O60353	706 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	GOLGA6D	P0CG33	693 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	IL4R	P24394	825 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ADCY8	P40145	1251 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	GPR1	P46091	355 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	ZNF165	P49910	485 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SRSF6	Q13247	344 aa	Known RBP	18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	SQSTM1	Q13501	440 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	PTPRR	Q15256	657 aa		18.17	■□□□□ 0.5
ATPAF2-209	ENST00000497871	HGSNAT	Q68CP4	663 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms