RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MDGA1Q8NFP4 955 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 OR4K2Q8NGD2 314 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 LPGAT1Q92604 370 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 EXT2Q93063 718 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 RCN3Q96D15 328 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF558Q96NG5 402 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 SERPINI1Q99574 410 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 TTC1Q99614 292 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 ERVK-6Q9BXR3 956 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 TNFRSF12AQ9NP84 129 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 STOML2Q9UJZ1 356 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 RAI2Q9Y5P3 530 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 PRRG1O14668 218 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 LIN7AO14910 233 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-220ENST00000496711 SUPT7LO94864 414 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 TMCC1O94876 653 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 C1RP00736 705 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 F11P03951 625 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 PRSS56P0CW18 603 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-220ENST00000496711 KCNC1P48547 511 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 VEGFBP49765 207 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 C1QTNF8P60827 252 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 TWF1Q12792 350 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 TRIM60Q495X7 471 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 BNC2Q6ZN30 1099 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-220ENST00000496711 CHSY3Q70JA7 882 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-220ENST00000496711 DSELQ8IZU8 1212 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-220ENST00000496711 RHEBL1Q8TAI7 183 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 TCF12Q99081 682 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 ADGRE3Q9BY15 652 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 TFB2MQ9H5Q4 396 aaKnown RBP13.03□□□□□ -0.32
GARNL3-220ENST00000496711 SYTL2Q9HCH5 934 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 SMPD4Q9NXE4 827 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 LRCH1Q9Y2L9 728 aa13.03□□□□□ -0.32
GARNL3-220ENST00000496711 RHOBTB1O94844 696 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 BAG2O95816 211 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 URODP06132 367 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 PDHA1P08559 390 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 HSPA1AP0DMV8 641 aaKnown RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 HSPA1BP0DMV9 641 aaKnown RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 LPOP22079 712 aaPredicted RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 ABL2P42684 1182 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 APLP1P51693 650 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 SMAD3P84022 425 aaKnown RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 TRAF2Q12933 501 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 RAB33AQ14088 237 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 SQLEQ14534 574 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 OR4D1Q15615 310 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 UNC50Q53HI1 259 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 PGAM4Q8N0Y7 254 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 PTGR2Q8N8N7 351 aaPredicted RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 HJURPQ8NCD3 748 aaPredicted RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 SLC26A7Q8TE54 656 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 PYDC1Q8WXC3 89 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 ZFRQ96KR1 1074 aaKnown RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 ASB2Q96Q27 587 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF184Q99676 751 aaPredicted RBP13.02□□□□□ -0.32
GARNL3-220ENST00000496711 TAS2R13Q9NYV9 303 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 STK39Q9UEW8 545 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 VPS28Q9UK41 221 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 TRAF6Q9Y4K3 522 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 PCDHGC4Q9Y5F7 938 aa13.02□□□□□ -0.32
GARNL3-220ENST00000496711 HELZP42694 1942 aaKnown RBP13.02□□□□□ -0.33
GARNL3-220ENST00000496711 TYW5A2RUC4 315 aaKnown RBP13.02□□□□□ -0.33
GARNL3-220ENST00000496711 H0Y626 953 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 UBXN8O00124 270 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 UBFD1O14562 309 aaKnown RBP13.02□□□□□ -0.33
GARNL3-220ENST00000496711 SNAP91O60641 907 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 TBL1XO60907 577 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 NDUFS3O75489 264 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 SRP72O76094 671 aaKnown RBP13.02□□□□□ -0.33
GARNL3-220ENST00000496711 CD160O95971 181 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 TLE2Q04725 743 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 BLMHQ13867 455 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 MAPRE2Q15555 327 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 LINGO4Q6UY18 593 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 DHDDSQ86SQ9 333 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 CARNMT1Q8N4J0 409 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 FAM136AQ96C01 138 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 TOX2Q96NM4 488 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 ATOH8Q96SQ7 321 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 RNF208Q9H0X6 261 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 EFCAB1Q9HAE3 211 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 LHX3Q9UBR4 397 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 INSL5Q9Y5Q6 135 aa13.02□□□□□ -0.33
GARNL3-220ENST00000496711 ANKRD66B4E2M5 251 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 H3BMM5 538 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 UBDO15205 165 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 PFDN6O15212 129 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 KERAO60938 352 aa13.01□□□□□ -0.33
GARNL3-220ENST00000496711 CCL5P13501 91 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms