RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
CBX4-204ENST00000495122 SCUBE2Q9NQ36 999 aa16.3■□□□□ 0.2
CBX4-204ENST00000495122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.3■□□□□ 0.2
CBX4-204ENST00000495122 HACD3Q9P035 362 aa16.3■□□□□ 0.2
CBX4-204ENST00000495122 SLC39A10Q9ULF5 831 aa16.3■□□□□ 0.2
CBX4-204ENST00000495122 ACOT9Q9Y305 439 aa16.3■□□□□ 0.2
CBX4-204ENST00000495122 FAM95CA0A1B0GW59 222 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 H0Y626 953 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 LDB2O43679 373 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 TBL1XO60907 577 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 LILRB5O75023 590 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 RPP40O75818 363 aaKnown RBP16.29■□□□□ 0.2
CBX4-204ENST00000495122 UBOX5O94941 541 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 GSRP00390 522 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 DLDP09622 509 aaKnown RBP16.29■□□□□ 0.2
CBX4-204ENST00000495122 CHRNB1P11230 501 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 TDGF1P13385 188 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 SLC1A2P43004 574 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 SOX9P48436 509 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 CSNK1DP48730 415 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 LIG3P49916 1009 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 RASSF2P50749 326 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 SLC12A2P55011 1212 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 PRAMEP78395 509 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 SLC20A2Q08357 652 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 MRNIPQ6NTE8 343 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 RETSATQ6NUM9 610 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 TSSK4Q6SA08 328 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.29■□□□□ 0.2
CBX4-204ENST00000495122 KIAA1958Q8N8K9 716 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 ARL14EPQ8N8R7 260 aaPredicted RBP16.29■□□□□ 0.2
CBX4-204ENST00000495122 ZBTB44Q8NCP5 570 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 OR13J1Q8NGT2 312 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 OR6Y1Q8NGX8 325 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 BPIFB1Q8TDL5 484 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 SLC46A2Q9BY10 475 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 C8orf33Q9H7E9 229 aaPredicted RBP16.29■□□□□ 0.2
CBX4-204ENST00000495122 NMRAL1Q9HBL8 299 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 POPDC3Q9HBV1 291 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 IL1RAPL1Q9NZN1 696 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 ARHGAP26Q9UNA1 814 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 VPS9D1Q9Y2B5 631 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 SH3BP1Q9Y3L3 701 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 PCDHGA2Q9Y5H1 932 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 CEP250Q9BV73 2442 aa16.29■□□□□ 0.2
CBX4-204ENST00000495122 CEP192Q8TEP8 1941 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 E2F8A0AVK6 867 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 MUSKO15146 869 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 ZMPSTE24O75844 475 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 FGF3P11487 239 aaPredicted RBP16.28■□□□□ 0.2
CBX4-204ENST00000495122 CTHP32929 405 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 RPL26P61254 145 aaKnown RBP16.28■□□□□ 0.2
CBX4-204ENST00000495122 AP1S1P61966 158 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 CDH18Q13634 790 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 CYTH1Q15438 398 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 TAF1AQ15573 450 aaPredicted RBP16.28■□□□□ 0.2
CBX4-204ENST00000495122 TBCCQ15814 346 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 MAMSTRQ6ZN01 415 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 RAPH1Q70E73 1250 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 CMC1Q7Z7K0 106 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 CILP2Q8IUL8 1156 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 WDR75Q8IWA0 830 aaKnown RBP16.28■□□□□ 0.2
CBX4-204ENST00000495122 KIRREL3Q8IZU9 778 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 CMTM8Q8IZV2 173 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 TCF12Q99081 682 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 TDRD1Q9BXT4 1180 aaKnown RBP16.28■□□□□ 0.2
CBX4-204ENST00000495122 SMG9Q9H0W8 520 aaKnown RBP16.28■□□□□ 0.2
CBX4-204ENST00000495122 LMAN1LQ9HAT1 526 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 ZSCAN32Q9NX65 697 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 TMEM216Q9P0N5 145 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 SLC2A6Q9UGQ3 507 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 GGT7Q9UJ14 662 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 RPL26L1Q9UNX3 145 aaKnown RBP16.28■□□□□ 0.2
CBX4-204ENST00000495122 CHKBQ9Y259 395 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 OR51B4Q9Y5P0 310 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 CAPN7Q9Y6W3 813 aa16.28■□□□□ 0.2
CBX4-204ENST00000495122 CACNA1AO00555 2505 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 GPR179Q6PRD1 2367 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.27■□□□□ 0.2
CBX4-204ENST00000495122 CCDC189A1A4V9 331 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 CBX4O00257 560 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 PFDN6O15212 129 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 UNC5CO95185 931 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 KLHL2O95198 593 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 CYBBP04839 570 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 PRKCGP05129 697 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 CKMP06732 381 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 RALBP11234 206 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 TCF3P15923 654 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 GABRB3P28472 473 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 SERPINB5P36952 375 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 SGSHP51688 502 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 PLK1P53350 603 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 TXNDC8Q6A555 127 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 FAM45BPQ6NSW5 357 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 TXNDC11Q6PKC3 985 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 ZYG11AQ6WRX3 759 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms