RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CYHR1Q6ZMK1 362 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 LARP4Q71RC2 724 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 RAB44Q7Z6P3 723 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 LILRA2Q8N149 483 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 GPR150Q8NGU9 434 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 ZNF512Q96ME7 567 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 NSUN5Q96P11 429 aaKnown RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 CYP2S1Q96SQ9 504 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 TRMOQ9BU70 441 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 MID1IP1Q9NPA3 183 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 GIMAP2Q9UG22 337 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 DNMT3LQ9UJW3 386 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 FNDC3AQ9Y2H6 1198 aaKnown RBP11.2□□□□□ -0.62
CHMP3-209ENST00000494623 PTGDR2Q9Y5Y4 395 aa11.2□□□□□ -0.62
CHMP3-209ENST00000494623 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 ADAM12O43184 909 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 TSPAN3O60637 253 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 RHOBTB1O94844 696 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 ZDHHC11BP0C7U3 371 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 ZNF37AP17032 561 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 HOXD9P28356 352 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 INHBCP55103 352 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 RALGDSQ12967 914 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 RARS2Q5T160 578 aaKnown RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 FBXL19Q6PCT2 694 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 PAQR3Q6TCH7 311 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 ISLR2Q6UXK2 745 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 OR4K2Q8NGD2 314 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 TRPC4APQ8TEL6 797 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 C19orf60Q96EN9 201 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 AKTIPQ9H8T0 292 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 GKN1Q9NS71 199 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 UBA2Q9UBT2 640 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 SEPT3Q9UH03 358 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 DNAJC15Q9Y5T4 150 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 PLXNA3P51805 1871 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 EME2A4GXA9 379 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 CDK14O94921 469 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 CRTAMO95727 393 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 SLC11A2P49281 568 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 CDKN1CP49918 316 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 STC1P52823 247 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 FOXA1P55317 472 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 OXCT1P55809 520 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 ADGRE1Q14246 886 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 KIF19Q2TAC6 998 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 UGT3A2Q3SY77 523 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 GALNT4Q8N4A0 578 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 ATP6V1E2Q96A05 226 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 KCNA7Q96RP8 456 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 TRIB3Q96RU7 358 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 AARSD1Q9BTE6 412 aaKnown RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 MAGEH1Q9H213 219 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 SPATS2LQ9NUQ6 558 aaKnown RBP11.19□□□□□ -0.62
CHMP3-209ENST00000494623 EPS15L1Q9UBC2 864 aa11.19□□□□□ -0.62
CHMP3-209ENST00000494623 TBKBP1A7MCY6 615 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 H7C4K7 107 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 CBX4O00257 560 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 MRASO14807 208 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 TBC1D4O60343 1298 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 NRP2O60462 931 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 NDUFS3O75489 264 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SRP72O76094 671 aaKnown RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 PENKP01210 267 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 GALTP07902 379 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 MTHFD2P13995 350 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SELPP16109 830 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 TRIM25Q14258 630 aaKnown RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ACBD5Q5T8D3 534 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 IL23RQ5VWK5 629 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 C16orf59Q7L2K0 433 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 GLT6D1Q7Z4J2 308 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 MDGA1Q8NFP4 955 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ZNF599Q96NL3 588 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 MGME1Q9BQP7 344 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 TTPALQ9BTX7 342 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 CCDC68Q9H2F9 335 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 RIMS3Q9UJD0 308 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 PCDHGC4Q9Y5F7 938 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SUPT3HB4E1H0 165 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 AZIN1O14977 448 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 PIP5K1BO14986 540 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 INSIG1O15503 277 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 DNAJA2O60884 412 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SUPT3HO75486 399 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 RNASEH2AO75792 299 aaKnown RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 ALDOCP09972 364 aaKnown RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 IRF1P10914 325 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 COL6A1P12109 1028 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 SGSHP51688 502 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 CDH4P55283 916 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 STX1BP61266 288 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 NFKB2Q00653 900 aa11.18□□□□□ -0.62
CHMP3-209ENST00000494623 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-209ENST00000494623 GPNMBQ14956 572 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms