RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PIN4Q9Y237 131 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 KLHL20Q9Y2M5 609 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PSAT1Q9Y617 370 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PIAS3Q9Y6X2 628 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TP53BP1Q12888 1972 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 UNC13AQ9UPW8 1703 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RUSC2Q8N2Y8 1516 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 NSD2O96028 1365 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 COL15A1P39059 1388 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MROH5Q6ZUA9 1318 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TTC21BQ7Z4L5 1316 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CENPJQ9HC77 1338 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 KIR2DS5A0A0G2JLQ3 304 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GOLGA6L10A0A0M3HER8 536 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 A0A1W2PPC1 479 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 DENND3A2RUS2 1198 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 LRRD1A4D1F6 860 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TRIM43BA6NCK2 446 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 LRRIQ4A6NIV6 560 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GPR89AB7ZAQ6 455 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 KIR2DS3K7RE56 304 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 O00370 1275 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PIP5K1BO14986 540 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ADAM20O43506 726 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ASNA1O43681 348 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SPOPO43791 374 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PEX11AO75192 247 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ACTL6BO94805 426 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CCNDBP1O95273 360 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ADCY5O95622 1261 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GGPS1O95749 300 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TPM3P06753 285 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ACAA1P09110 424 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CNPP09543 421 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC172P0C7W6 258 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GPR89BP0CG08 455 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MYL4P12829 197 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ST6GAL1P15907 406 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PDGFRAP16234 1089 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TYMPP19971 482 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CCNA2P20248 432 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SP100P23497 879 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 YY1P25490 414 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 DUSP1P28562 367 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CIITAP33076 1130 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RFC4P35249 363 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SOX6P35712 828 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PSMC2P35998 433 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PIP4K2AP48426 406 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 LMAN1P49257 510 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 AMPHP49418 695 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CENPAP49450 140 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 NT5C2P49902 561 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ETV1P50549 477 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PNLIPRP1P54315 467 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RPS3AP61247 264 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 KCNJ10P78508 379 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ARF5P84085 180 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 BEX3Q00994 111 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RELQ04864 619 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GAD2Q05329 585 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 NSUN2Q08J23 767 aaKnown RBP eCLIP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GALNT2Q10471 571 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CETN1Q12798 172 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GPR68Q15743 365 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 INAQ16352 499 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 IMMTQ16891 758 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 C15orf59Q2T9L4 293 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 BOLA3Q53S33 107 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 FAM76BQ5HYJ3 339 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 KCNT1Q5JUK3 1230 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 GLRA4Q5JXX5 417 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SPDYCQ5MJ68 293 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PIK3CD-AS1Q5SR53 167 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 LIPMQ5VYY2 423 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 KRT80Q6KB66 452 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MTFR2Q6P444 385 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 INO80CQ6PI98 192 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 PPP1R21Q6ZMI0 780 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 DENND5BQ6ZUT9 1274 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 USP49Q70CQ1 688 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 IKBIPQ70UQ0 350 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 INTS8Q75QN2 995 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CHST3Q7LGC8 479 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 RABEPKQ7Z6M1 372 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 ADGRA1Q86SQ6 560 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MICU3Q86XE3 530 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 LRRC49Q8IUZ0 686 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 WDR63Q8IWG1 891 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 TUSC5Q8IXB3 177 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC105Q8IYK2 499 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SCML4Q8N228 414 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 C17orf53Q8N3J3 647 aaPredicted RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 MRPL43Q8N983 215 aaKnown RBP2.28□□□□□ -2.04
PTPN12-212ENST00000494248 SPERTQ8NA61 448 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 FAM47BQ8NA70 645 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 POGLUT1Q8NBL1 392 aa2.28□□□□□ -2.04
PTPN12-212ENST00000494248 CNNM3Q8NE01 707 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms