RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 RAB6BQ9NRW1 208 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 DNAJC28Q9NX36 388 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 PAK5Q9P286 719 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 SPO11Q9Y5K1 396 aa13.95□□□□□ -0.18
CCM2-217ENST00000492883 ZFHX2Q9C0A1 2572 aaPredicted RBP13.95□□□□□ -0.18
CCM2-217ENST00000492883 SDK1Q7Z5N4 2213 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 RGSL1A5PLK6 1076 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 K7ESM1 405 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 CACNB4O00305 520 aaPredicted RBP13.94□□□□□ -0.18
CCM2-217ENST00000492883 AURKAO14965 403 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 YKT6O15498 198 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 USP12O75317 370 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 ZSCAN5DPP0CG00 497 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 TSHRP16473 764 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 CASQ1P31415 396 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 RPL22P35268 128 aaKnown RBP13.94□□□□□ -0.18
CCM2-217ENST00000492883 ADRA1AP35348 466 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 FDFT1P37268 417 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 ID4P47928 161 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 RXRGP48443 463 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 DPTQ07507 201 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 OLIG2Q13516 323 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 FZD2Q14332 565 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCM2-217ENST00000492883 TPRG1LQ5T0D9 272 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 ENPP7Q6UWV6 458 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 NLRP8Q86W28 1048 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 PARGQ86W56 976 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 SETD7Q8WTS6 366 aaKnown RBP13.94□□□□□ -0.18
CCM2-217ENST00000492883 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 RIOK2Q9BVS4 552 aaKnown RBP13.94□□□□□ -0.18
CCM2-217ENST00000492883 WDR26Q9H7D7 661 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 ETNK1Q9HBU6 452 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 GPR27Q9NS67 375 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 RAD18Q9NS91 495 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 HACD3Q9P035 362 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 PCDHGB2Q9Y5G2 931 aa13.94□□□□□ -0.18
CCM2-217ENST00000492883 DCDC2BA2VCK2 349 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 H3BM21 787 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 PDE2AO00408 941 aaPredicted RBP13.93□□□□□ -0.18
CCM2-217ENST00000492883 SDC3O75056 442 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 AP2A1O95782 977 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 PYGLP06737 847 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 CD59P13987 128 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 KELP23276 732 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 TRIM23P36406 574 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 COILP38432 576 aaPredicted RBP13.93□□□□□ -0.18
CCM2-217ENST00000492883 ETF1P62495 437 aaKnown RBP13.93□□□□□ -0.18
CCM2-217ENST00000492883 BNIP3Q12983 259 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 NFATC4Q14934 902 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 SHBQ15464 509 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 KCTD11Q693B1 232 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 MACC1Q6ZN28 852 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 RD3Q7Z3Z2 195 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 GLT6D1Q7Z4J2 308 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 GATAD2AQ86YP4 633 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 PELI3Q8N2H9 469 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 GLIS1Q8NBF1 620 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 FUBP1Q96AE4 644 aaKnown RBP13.93□□□□□ -0.18
CCM2-217ENST00000492883 EID2BQ96D98 161 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 WDR92Q96MX6 357 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 SLC32A1Q9H598 525 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 BPIFA1Q9NP55 256 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 PHPT1Q9NRX4 125 aaPredicted RBP13.93□□□□□ -0.18
CCM2-217ENST00000492883 DLL3Q9NYJ7 618 aa13.93□□□□□ -0.18
CCM2-217ENST00000492883 FEZ2Q9UHY8 353 aaPredicted RBP13.93□□□□□ -0.18
CCM2-217ENST00000492883 ERI2A8K979 691 aaKnown RBP13.92□□□□□ -0.18
CCM2-217ENST00000492883 TM4SF5O14894 197 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 SH3BP5O60239 455 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 PCDHGA12O60330 932 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 CSF2P04141 144 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 HOXC4P09017 264 aaPredicted RBP13.92□□□□□ -0.18
CCM2-217ENST00000492883 JUNDP17535 347 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 KCNA4P22459 653 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 EPHA8P29322 1005 aaPredicted RBP13.92□□□□□ -0.18
CCM2-217ENST00000492883 HMGCLP35914 325 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 PAFAH1B1P43034 410 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 BLKP51451 505 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 HNRNPKP61978 463 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCM2-217ENST00000492883 CDK3Q00526 305 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 PPARDQ03181 441 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 EIF2B5Q13144 721 aaKnown RBP13.92□□□□□ -0.18
CCM2-217ENST00000492883 TRIP13Q15645 432 aaPredicted RBP13.92□□□□□ -0.18
CCM2-217ENST00000492883 CYP1B1Q16678 543 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 ALS2CLQ60I27 953 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 TTC27Q6P3X3 843 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 CCDC137Q6PK04 289 aaKnown RBP13.92□□□□□ -0.18
CCM2-217ENST00000492883 SYT10Q6XYQ8 523 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 LINC00523Q86TU6 105 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 HEATR4Q86WZ0 1026 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 KLHDC8BQ8IXV7 354 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 RHBDD1Q8TEB9 315 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 SAP25Q8TEE9 199 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 AGAP2Q99490 1192 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 LGR4Q9BXB1 951 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 TEX101Q9BY14 249 aa13.92□□□□□ -0.18
CCM2-217ENST00000492883 SLC13A1Q9BZW2 595 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms