RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PANK4	Q9NVE7	773 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	FAM13B	Q9NYF5	915 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	HESX1	Q9UBX0	185 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ZNHIT2	Q9UHR6	403 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	SLC12A6	Q9UHW9	1150 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ST6GALNAC2	Q9UJ37	374 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	TSPAN16	Q9UKR8	245 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	VANGL2	Q9ULK5	521 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	MAPK8IP1	Q9UQF2	711 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	FCF1	Q9Y324	198 aa	Known RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	ATP6V1D	Q9Y5K8	247 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	SRPRB	Q9Y5M8	271 aa	Known RBP	5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	GTF3C3	Q9Y5Q9	886 aa		5.36	□□□□□ -1.55
SEC13-219	ENST00000492602	MXRA5	Q9NR99	2828 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	AKAP6	Q13023	2319 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602		A0A0D9SEW6	157 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602		K7ELQ4	463 aa	Predicted RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	KRIT1	O00522	736 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PCDH17	O14917	1159 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	TGFB1I1	O43294	461 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	EXOC3	O60645	756 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CLDN11	O75508	207 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	UNC5C	O95185	931 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ZWINT	O95229	277 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	F12	P00748	615 aa	Predicted RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	FYN	P06241	537 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ANKRD34C	P0C6C1	535 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CD44	P16070	742 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SCNN1A	P37088	669 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	GGCX	P38435	758 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ACTR1B	P42025	376 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PIK3CA	P42336	1068 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	GNPDA1	P46926	289 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	FASLG	P48023	281 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	RGS7	P49802	495 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SERPINH1	P50454	418 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	TDGF1P3	P51864	188 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	DGKQ	P52824	942 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CASP6	P55212	293 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	GFER	P55789	205 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ACTR1A	P61163	376 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SNRPF	P62306	86 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CTBS	Q01459	385 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	RUNX1T1	Q06455	604 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	BST2	Q10589	180 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	NFATC2	Q13469	925 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ZNF169	Q14929	603 aa	Predicted RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	LONRF1	Q17RB8	773 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ZACN	Q401N2	412 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CES4A	Q5XG92	561 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ATL3	Q6DD88	541 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PWWP2B	Q6NUJ5	590 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	RETSAT	Q6NUM9	610 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PLXDC1	Q8IUK5	500 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	HSCB	Q8IWL3	235 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CEP57L1	Q8IYX8	460 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SCML4	Q8N228	414 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PDILT	Q8N807	584 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ENDOV	Q8N8Q3	282 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	DCAF4L2	Q8NA75	395 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SLC4A11	Q8NBS3	891 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CLEC1A	Q8NC01	280 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	GOLGA5	Q8TBA6	731 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SLC37A2	Q8TED4	501 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PARD3B	Q8TEW8	1205 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PPP4R1	Q8TF05	950 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	TMEM158	Q8WZ71	300 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	IRGQ	Q8WZA9	623 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SCARF2	Q96GP6	870 aa	Predicted RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	C9orf72	Q96LT7	481 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	USP28	Q96RU2	1077 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	TREX2	Q9BQ50	279 aa	Predicted RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SPON2	Q9BUD6	331 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	SGPP1	Q9BX95	441 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	IMPG2	Q9BZV3	1241 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CEP44	Q9C0F1	390 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	MIS12	Q9H081	205 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	APOBEC3G	Q9HC16	384 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	NDFIP2	Q9NV92	336 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	TRNAU1AP	Q9NX07	287 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	CGN	Q9P2M7	1197 aa	Known RBP	5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	PLEKHA6	Q9Y2H5	1048 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	TBC1D30	Q9Y2I9	924 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ST14	Q9Y5Y6	855 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	ACTL7A	Q9Y615	435 aa		5.35	□□□□□ -1.55
SEC13-219	ENST00000492602	HIVEP2	P31629	2446 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	CACNA1C	Q13936	2221 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	SYNJ2BP-COX16	A0A087WUM0	186 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	PDE2A	O00408	941 aa	Predicted RBP	5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	IKBKB	O14920	756 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	TEX33	O43247	280 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	PROM1	O43490	865 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	BUB1B	O60566	1050 aa	Predicted RBP	5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	RASSF9	O75901	435 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	HLA-DRA	P01903	254 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	XPA	P23025	273 aa	Predicted RBP	5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	ARCN1	P48444	511 aa	Known RBP	5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	LIG3	P49916	1009 aa		5.34	□□□□□ -1.55
SEC13-219	ENST00000492602	RAD23B	P54727	409 aa		5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms