RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SPECC1LQ69YQ0 1117 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 RAET1GQ6H3X3 334 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CRTC1Q6UUV9 634 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CCDC81Q6ZN84 652 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 ARHGAP36Q6ZRI8 547 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 H2AFVQ71UI9 128 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 ZNF765Q7L2R6 523 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 RAB11FIP2Q7L804 512 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 SPRED1Q7Z699 444 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 NRSN1Q8IZ57 195 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CBARPQ8N350 705 aaPredicted RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 TEX26Q8N6G2 289 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 PLA2G15Q8NCC3 412 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CCDC112Q8NEF3 446 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 ZNF564Q8TBZ8 553 aaPredicted RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 GPBAR1Q8TDU6 330 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CTNNBL1Q8WYA6 563 aaPredicted RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 OR1E3Q8WZA6 343 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 PRR11Q96HE9 360 aaPredicted RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 NAF1Q96HR8 494 aaKnown RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 ZNF830Q96NB3 372 aaPredicted RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 CMKLR1Q99788 373 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 FUCA2Q9BTY2 467 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 THAP2Q9H0W7 228 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CDH19Q9H159 772 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CLMPQ9H6B4 373 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CARS2Q9HA77 564 aaKnown RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 NOD2Q9HC29 1040 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 EPB41L5Q9HCM4 733 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 FGF22Q9HCT0 170 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 ZNHIT6Q9NWK9 470 aaKnown RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 LRIT1Q9P2V4 623 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 MOSPD1Q9UJG1 213 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 KIF26BQ2KJY2 2108 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 RGSL1A5PLK6 1076 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 RHPN2P1A8MT19 583 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 ZNF487B1APH4 448 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 B4DGG1 531 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 HGSO14964 777 aaPredicted RBP8.74□□□□□ -1.01
NUP50-217ENST00000491860 MATN3O15232 486 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 NVLO15381 856 aaKnown RBP8.74□□□□□ -1.01
NUP50-217ENST00000491860 CBFA2T2O43439 604 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 NOBOXO60393 691 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 PROSCO94903 275 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 CPNE6O95741 557 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 PRKCGP05129 697 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 CELA2BP08218 269 aaPredicted RBP8.74□□□□□ -1.01
NUP50-217ENST00000491860 TPM1P09493 284 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 MAN1A1P33908 653 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 UGT1A5P35504 534 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 PBX1P40424 430 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 GPR1P46091 355 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 PDX1P52945 283 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 CCL7P80098 99 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 CDK3Q00526 305 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 ITKQ08881 620 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 GALNT2Q10471 571 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 TRAF2Q12933 501 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 TRA2AQ13595 282 aaKnown RBP eCLIP8.74□□□□□ -1.01
NUP50-217ENST00000491860 LRP8Q14114 963 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 NR1D2Q14995 579 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 ALG1LQ6GMV1 187 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 ADAMTSL4Q6UY14 1074 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 PIM3Q86V86 326 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 HEATR4Q86WZ0 1026 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 VSIG1Q86XK7 387 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 AVL9Q8NBF6 648 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 KCTD6Q8NC69 237 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 ZDHHC1Q8WTX9 485 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 MAML1Q92585 1016 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 TSGA13Q96PP4 275 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 CCNL2Q96S94 520 aaPredicted RBP8.74□□□□□ -1.01
NUP50-217ENST00000491860 FRMD8Q9BZ67 464 aaPredicted RBP8.74□□□□□ -1.01
NUP50-217ENST00000491860 TMEM168Q9H0V1 697 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 CBX8Q9HC52 389 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 ETNK2Q9NVF9 386 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 ATXN7L1Q9ULK2 861 aaPredicted RBP8.74□□□□□ -1.01
NUP50-217ENST00000491860 SLC17A4Q9Y2C5 497 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 PCDHB11Q9Y5F2 797 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 AHCTF1Q8WYP5 2266 aa8.74□□□□□ -1.01
NUP50-217ENST00000491860 A0A087X0T9 212 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 A0A0J9YYE9 177 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 A0A1W2PQM1 296 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 GOLGA6CA6NDK9 693 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 GOLGA6BA6NDN3 693 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 B8ZZF3 427 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 K7ENP7 123 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 FZD6O60353 706 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 TRBC1P01850 177 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 CEACAM5P06731 702 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 FAM228BP0C875 321 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 GOLGA6DP0CG33 693 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 LIPCP11150 499 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 SLC2A4P14672 509 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 ZFXP17010 805 aaPredicted RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 GM2AP17900 193 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 HNRNPH3P31942 346 aaKnown RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 ETV3P41162 512 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 GPLD1P80108 840 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms