RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PTPRCAPQ14761 206 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 PTPRRQ15256 657 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 IER5LQ5T953 404 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 STRA8Q7Z7C7 330 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 CILP2Q8IUL8 1156 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 OR6P1Q8NGX9 317 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 ISL2Q96A47 359 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 ARRDC3Q96B67 414 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 HDAC8Q9BY41 377 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 RHOJQ9H4E5 214 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 PCDH12Q9NPG4 1184 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 NFKBIL1Q9UBC1 381 aaPredicted RBP14.15□□□□□ -0.14
VPS26A-205ENST00000489656 B4GALT6Q9UBX8 382 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 FBXO5Q9UKT4 447 aa14.15□□□□□ -0.14
VPS26A-205ENST00000489656 HMX2A2RU54 273 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 TRIM49D1C9J1S8 452 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 GOLGA8TH3BQL2 631 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 CD3EAPO15446 510 aaKnown RBP14.14□□□□□ -0.15
VPS26A-205ENST00000489656 CLDN7O95471 211 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 ADH1BP00325 375 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 GOT2P00505 430 aaKnown RBP14.14□□□□□ -0.15
VPS26A-205ENST00000489656 ITGA2BP08514 1039 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 KRT15P19012 456 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 NR1D1P20393 614 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 LHCGRP22888 699 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 FOXN2P32314 431 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 MMP12P39900 470 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 SLC1A2P43004 574 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 POLD2P49005 469 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 STC1P52823 247 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 SEC13P55735 322 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 TMPRSS15P98073 1019 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 XIAPP98170 497 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 PRKCQQ04759 706 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 PEX6Q13608 980 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 CCINQ13939 588 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 MLF2Q15773 248 aaPredicted RBP14.14□□□□□ -0.15
VPS26A-205ENST00000489656 TYSND1Q2T9J0 566 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 ZDHHC20Q5W0Z9 365 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 LRRC66Q68CR7 880 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 ZNF470Q6ECI4 717 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 SDE2Q6IQ49 451 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 MRNIPQ6NTE8 343 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 ERAP2Q6P179 960 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 TSPAN33Q86UF1 283 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 DENND6AQ8IWF6 608 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 IL17RCQ8NAC3 791 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 OR2T3Q8NH03 318 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 DTX3LQ8TDB6 740 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 FAM3CQ92520 227 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 RAB7BQ96AH8 199 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 TCF12Q99081 682 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 SUDS3Q9H7L9 328 aaPredicted RBP14.14□□□□□ -0.15
VPS26A-205ENST00000489656 SSU72Q9NP77 194 aaKnown RBP14.14□□□□□ -0.15
VPS26A-205ENST00000489656 ZDHHC4Q9NPG8 344 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 CATSPERZQ9NTU4 200 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 FKBPLQ9UIM3 349 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 APPL1Q9UKG1 709 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 SORCS3Q9UPU3 1222 aa14.14□□□□□ -0.15
VPS26A-205ENST00000489656 RGSL1A5PLK6 1076 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 H0Y858 1186 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 PSMD11O00231 422 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 CCL22O00626 93 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 AREL1O15033 823 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 SYNCRIPO60506 623 aaKnown RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 RNASEH1O60930 286 aaKnown RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ADAM23O75077 832 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 IL1BP01584 269 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 AHSGP02765 367 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 C1SP09871 688 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 XPAP23025 273 aaPredicted RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 GABRB3P28472 473 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 NEK3P51956 506 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 PPP2R2AP63151 447 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 PTSQ03393 145 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ELP6Q0PNE2 266 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 RALGDSQ12967 914 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ARHGEF7Q14155 803 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 STARD3Q14849 445 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 FASTKD1Q53R41 847 aaKnown RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 KDM7AQ6ZMT4 941 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 SH2D5Q6ZV89 423 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ERN2Q76MJ5 926 aaKnown RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 PTAR1Q7Z6K3 402 aaPredicted RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 TTC7BQ86TV6 843 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ZC3HC1Q86WB0 502 aaKnown RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 MMAAQ8IVH4 418 aaKnown RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ARFGAP2Q8N6H7 521 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 FAM76AQ8TAV0 307 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ACMSDQ8TDX5 336 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 PBXIP1Q96AQ6 731 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 ALKBH8Q96BT7 664 aaKnown RBP14.13□□□□□ -0.15
VPS26A-205ENST00000489656 VPS39Q96JC1 886 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 PLEKHG4BQ96PX9 1271 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 GPR22Q99680 433 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 CD248Q9HCU0 757 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 PRDM6Q9NQX0 595 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 DYRK4Q9NR20 520 aa14.13□□□□□ -0.15
VPS26A-205ENST00000489656 RAD18Q9NS91 495 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms