RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MKRN2OSH3BPM6 223 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 SEMA7AO75326 666 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 MMEP08473 750 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 RNF224P0DH78 156 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 SERPINA4P29622 427 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 PTPN9P43378 593 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 CSNK1DP48730 415 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 GPLD1P80108 840 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 ARHGAP22Q7Z5H3 698 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 SLFN11Q7Z7L1 901 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 UMODL1-AS1Q8N2C9 162 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 PAF1Q8N7H5 531 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 TSEN2Q8NCE0 465 aaKnown RBP16.15■□□□□ 0.18
USP48-210ENST00000489108 GALNT11Q8NCW6 608 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 NTAN1Q96AB6 310 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 COQ10AQ96MF6 247 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 ZPBPQ9BS86 351 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 ESPL1Q14674 2120 aa16.15■□□□□ 0.18
USP48-210ENST00000489108 TTLL8A6PVC2 850 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 WASH4PA8MWX3 477 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 CREB3O43889 395 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 FURINP09958 794 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 ACTR1BP42025 376 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 STAT5AP42229 794 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 COPB1P53618 953 aaKnown RBP16.14■□□□□ 0.17
USP48-210ENST00000489108 ACTR1AP61163 376 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 POLR2LP62875 67 aaKnown RBP16.14■□□□□ 0.17
USP48-210ENST00000489108 BCL2L1Q07817 233 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 PEX6Q13608 980 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 EFCAB3Q8N7B9 438 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 NUS1Q96E22 293 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 RNF31Q96EP0 1072 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 NSMCE3Q96MG7 304 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 SLC38A3Q99624 504 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 TLK1Q9UKI8 766 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 PCDHB3Q9Y5E6 796 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 RPS6KL1Q9Y6S9 549 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 CENPEQ02224 2701 aa16.14■□□□□ 0.17
USP48-210ENST00000489108 PRAMEF11O60813 436 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 DLGAP3O95886 979 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 COL8A1P27658 744 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 ERCC5P28715 1186 aaPredicted RBP16.13■□□□□ 0.17
USP48-210ENST00000489108 MAN1A1P33908 653 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 MTIF2P46199 727 aaKnown RBP16.13■□□□□ 0.17
USP48-210ENST00000489108 CDK3Q00526 305 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 ERV3-1Q14264 604 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 ZNF787Q6DD87 383 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 OR10G6Q8NH81 332 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 LRRC19Q9H756 370 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 CATSPERBQ9H7T0 1116 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 B4GALT6Q9UBX8 382 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 SLC17A4Q9Y2C5 497 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 FHOD1Q9Y613 1164 aa16.13■□□□□ 0.17
USP48-210ENST00000489108 TNRC6AQ8NDV7 1962 aaKnown RBP16.13■□□□□ 0.17
USP48-210ENST00000489108 MED13Q9UHV7 2174 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 TRAFD1O14545 582 aaPredicted RBP16.12■□□□□ 0.17
USP48-210ENST00000489108 POLR1CO15160 346 aaPredicted RBP16.12■□□□□ 0.17
USP48-210ENST00000489108 PALMO75781 387 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 PDGFAP04085 211 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 IVLP07476 585 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 MMP8P22894 467 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 RFC1P35251 1148 aaPredicted RBP16.12■□□□□ 0.17
USP48-210ENST00000489108 CNGA3Q16281 694 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 SCYL2Q6P3W7 929 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 DOK6Q6PKX4 331 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 WDR74Q6RFH5 385 aaPredicted RBP16.12■□□□□ 0.17
USP48-210ENST00000489108 ESX1Q8N693 406 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 SLC30A5Q8TAD4 765 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 CPT1CQ8TCG5 803 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 SLC37A2Q8TED4 501 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 NCSTNQ92542 709 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 CELF6Q96J87 481 aaKnown RBP16.12■□□□□ 0.17
USP48-210ENST00000489108 SLC39A8Q9C0K1 460 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 RWDD2AQ9UIY3 292 aa16.12■□□□□ 0.17
USP48-210ENST00000489108 GOLGA6CA6NDK9 693 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 GOLGA6BA6NDN3 693 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 GOLGA6DP0CG33 693 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 DLSTP36957 453 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 ETV3P41162 512 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 NOP2P46087 812 aaKnown RBP16.11■□□□□ 0.17
USP48-210ENST00000489108 FASLGP48023 281 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 PAPOLAP51003 745 aaKnown RBP16.11■□□□□ 0.17
USP48-210ENST00000489108 KLHDC7AQ5VTJ3 777 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 TMEM135Q86UB9 458 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 CBARPQ8N350 705 aaPredicted RBP16.11■□□□□ 0.17
USP48-210ENST00000489108 SLC20A1Q8WUM9 679 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 C11orf70Q9BRQ4 267 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 GOLGA6AQ9NYA3 693 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 KLHL3Q9UH77 587 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 POLHQ9Y253 713 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 TMEM98Q9Y2Y6 226 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 CELSR2Q9HCU4 2923 aa16.11■□□□□ 0.17
USP48-210ENST00000489108 SHANK1Q9Y566 2161 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 CRYBG3Q68DQ2 2970 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 TTC24A2A3L6 582 aaPredicted RBP16.1■□□□□ 0.17
USP48-210ENST00000489108 KATNA1O75449 491 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 RFPL1O75677 317 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 MAP3K6O95382 1288 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 EML2O95834 649 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms