RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 LYSMD1Q96S90 227 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 DPH5Q9H2P9 285 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 CASS4Q9NQ75 786 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 RAD18Q9NS91 495 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 PKD2L2Q9NZM6 624 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 GGT7Q9UJ14 662 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 SHOC2Q9UQ13 582 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 DMTF1Q9Y222 760 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 PKP3Q9Y446 797 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 ZNF711Q9Y462 761 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 GPSM3Q9Y4H4 160 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 R4GN57 208 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 A0A1W2PPC4 97 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 TCRBV7S3A2A0A539 114 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 RGSL1A5PLK6 1076 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 GOLGA8MH3BSY2 632 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 STX7O15400 261 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 SLC4A1P02730 911 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 C6P13671 934 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 GNSP15586 552 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 CD27P26842 260 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 AKT2P31751 481 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 DPP6P42658 865 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 RPL21P46778 160 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 DRG2P55039 364 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 PPP2CBP62714 309 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 PPP2CAP67775 309 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 GUCY2DQ02846 1103 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 CAV1Q03135 178 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 PTSQ03393 145 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 TCF15Q12870 199 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 RALGDSQ12967 914 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 SEPT6Q14141 434 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 KCNJ11Q14654 390 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 STAT4Q14765 748 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 POU6F1Q14863 301 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 MORF4L2Q15014 288 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 TAF1AQ15573 450 aaPredicted RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 CNGA3Q16281 694 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 ZNF284Q2VY69 593 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 RNASEH2BQ5TBB1 312 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 PMS2CLQ68D20 193 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 DUPD1Q68J44 220 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 ARMCX6Q7L4S7 300 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 LYSMD3Q7Z3D4 306 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 TMC3Q7Z5M5 1100 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 TSPAN33Q86UF1 283 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 RAVER1Q8IY67 606 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 NRSN1Q8IZ57 195 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 NAT8LQ8N9F0 302 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 NOA1Q8NC60 698 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 ASB12Q8WXK4 309 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 SERAC1Q96JX3 654 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 SMIM14Q96QK8 99 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 FRMD8Q9BZ67 464 aaPredicted RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 MIR1-1HGQ9H1L0 117 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 SEMA4AQ9H3S1 761 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 XAB2Q9HCS7 855 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 PIH1D1Q9NWS0 290 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.29□□□□□ -0.76
SKA1-204ENST00000488454 WHRNQ9P202 907 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 ZFR2Q9UPR6 939 aaKnown RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.29□□□□□ -0.76
SKA1-204ENST00000488454 MAP4K5Q9Y4K4 846 aa10.29□□□□□ -0.76
SKA1-204ENST00000488454 MAGEB16A2A368 324 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 SDR42E2A6NKP2 422 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 PRAMEF26H0Y7S4 382 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 FPGTO14772 594 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 SPINT1O43278 529 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 LATO43561 262 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 PPFIA2O75334 1257 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 RECQL5O94762 991 aaPredicted RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 SEC31AO94979 1220 aaKnown RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 SLU7O95391 586 aaKnown RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 IGHV4-34P06331 123 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 MLNP12872 115 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 LPOP22079 712 aaPredicted RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 HNRNPA2B1P22626 353 aaKnown RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 LHCGRP22888 699 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 ADRA1DP25100 572 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 IVDP26440 423 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 MAOBP27338 520 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 HMGCLP35914 325 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 GRIA1P42261 906 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 SPINT3P49223 89 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 STC1P52823 247 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 ITGA8P53708 1063 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 LRRC14Q15048 493 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 CDKN3Q16667 212 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 DNAJC21Q5F1R6 531 aaKnown RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 PCID2Q5JVF3 399 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 CERCAMQ5T4B2 595 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 ANKRD22Q5VYY1 191 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 ZDHHC20Q5W0Z9 365 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 HIBCHQ6NVY1 386 aaPredicted RBP10.28□□□□□ -0.76
SKA1-204ENST00000488454 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 Q6ZVL8 140 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 NLRP9Q7RTR0 991 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 CYP2U1Q7Z449 544 aa10.28□□□□□ -0.76
SKA1-204ENST00000488454 HSD11B1LQ7Z5J1 315 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms