RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 KLHL29Q96CT2 875 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 SH3GL2Q99962 352 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 MXRA8Q9BRK3 442 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 CACNG5Q9UF02 275 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 POLG2Q9UHN1 485 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 STON1Q9Y6Q2 735 aa2.98□□□□□ -1.93
SMC4-220ENST00000488017 ZNHIT1O43257 154 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 MMP2P08253 660 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 CD48P09326 243 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 TUBB2AQ13885 445 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 CBWD5Q5RIA9 395 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 SULT6B1Q6IMI4 303 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 DENND1BQ6P3S1 775 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 PGBD2Q6P3X8 592 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 FAM171BQ6P995 826 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 RSRC2Q7L4I2 434 aaKnown RBP2.97□□□□□ -1.93
SMC4-220ENST00000488017 CPXM2Q8N436 756 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 BMPERQ8N8U9 685 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 LINS1Q8NG48 757 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 PIGTQ969N2 578 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 FBXL8Q96CD0 374 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 ARHGEF26Q96DR7 871 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 TWNKQ96RR1 684 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 MTERF1Q99551 399 aaKnown RBP2.97□□□□□ -1.93
SMC4-220ENST00000488017 TUBB2BQ9BVA1 445 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 PLEKHA4Q9H4M7 779 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 ARFGAP3Q9NP61 516 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 MKKSQ9NPJ1 570 aaPredicted RBP2.97□□□□□ -1.93
SMC4-220ENST00000488017 LOXL2Q9Y4K0 774 aa2.97□□□□□ -1.93
SMC4-220ENST00000488017 G6PDP11413 515 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 MAOAP21397 527 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 GATA2P23769 480 aaPredicted RBP2.96□□□□□ -1.94
SMC4-220ENST00000488017 TLX1P31314 330 aaPredicted RBP2.96□□□□□ -1.94
SMC4-220ENST00000488017 EIF2S3P41091 472 aaKnown RBP2.96□□□□□ -1.94
SMC4-220ENST00000488017 CCDC96Q2M329 555 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 ZC2HC1CQ53FD0 456 aaPredicted RBP2.96□□□□□ -1.94
SMC4-220ENST00000488017 TANGO2Q6ICL3 276 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 GGT6Q6P531 493 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 ZNF613Q6PF04 617 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 CDC20BQ86Y33 519 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 FMNL3Q8IVF7 1028 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 OR2AK2Q8NG84 335 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 GOLGA1Q92805 767 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 DDX4Q9NQI0 724 aaKnown RBP2.96□□□□□ -1.94
SMC4-220ENST00000488017 ADPRHL2Q9NX46 363 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 CDC23Q9UJX2 597 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 CARD8Q9Y2G2 431 aa2.96□□□□□ -1.94
SMC4-220ENST00000488017 MRPS28Q9Y2Q9 187 aaKnown RBP2.96□□□□□ -1.94
SMC4-220ENST00000488017 CTSVO60911 334 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 KRT38O76015 456 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 ETFAP13804 333 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 SLC2A4P14672 509 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 ZNF23P17027 643 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 DDIT3P35638 169 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 GALNT1Q10472 559 aaPredicted RBP2.95□□□□□ -1.94
SMC4-220ENST00000488017 TCTEX1D4Q5JR98 221 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 ZNF774Q6NX45 483 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 PPHLN1Q8NEY8 458 aaKnown RBP2.95□□□□□ -1.94
SMC4-220ENST00000488017 BEST2Q8NFU1 509 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 RAB40AQ8WXH6 277 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 RBM17Q96I25 401 aaKnown RBP2.95□□□□□ -1.94
SMC4-220ENST00000488017 TNIP3Q96KP6 325 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 MPHOSPH8Q99549 860 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 SYT11Q9BT88 431 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 TAF1DQ9H5J8 278 aaPredicted RBP2.95□□□□□ -1.94
SMC4-220ENST00000488017 INTS10Q9NVR2 710 aaKnown RBP2.95□□□□□ -1.94
SMC4-220ENST00000488017 BABAM1Q9NWV8 329 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 CSAG2Q9Y5P2 127 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 DISP3Q9P2K9 1392 aa2.95□□□□□ -1.94
SMC4-220ENST00000488017 CEP104O60308 925 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 FAM106CPP0CH98 169 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 TYMPP19971 482 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 AGAP20933 346 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 PDIA3P30101 505 aaKnown RBP2.94□□□□□ -1.94
SMC4-220ENST00000488017 BDKRB2P30411 391 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 CLDN2P57739 230 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 TMEM35AQ53FP2 167 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 TTI2Q6NXR4 508 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 TRIM65Q6PJ69 517 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 C17orf99Q6UX52 265 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 MOB3CQ70IA8 216 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 LINGO2Q7L985 606 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 KIAA2013Q8IYS2 634 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 FBXL16Q8N461 479 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 OR52I2Q8NH67 350 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 THAP4Q8WY91 577 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 LINGO1Q96FE5 620 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 ZNF300Q96RE9 604 aaPredicted RBP2.94□□□□□ -1.94
SMC4-220ENST00000488017 IWS1Q96ST2 819 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 CMKLR1Q99788 373 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 KCNN2Q9H2S1 579 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 TAF1P21675 1872 aa2.94□□□□□ -1.94
SMC4-220ENST00000488017 A0A087WV62 115 aa2.93□□□□□ -1.94
SMC4-220ENST00000488017 ACKR2O00590 384 aa2.93□□□□□ -1.94
SMC4-220ENST00000488017 CYC1P08574 325 aa2.93□□□□□ -1.94
SMC4-220ENST00000488017 CST5P28325 142 aaPredicted RBP2.93□□□□□ -1.94
SMC4-220ENST00000488017 SHC1P29353 583 aa2.93□□□□□ -1.94
SMC4-220ENST00000488017 METAP2P50579 478 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMC4-220ENST00000488017 SPOCK1Q08629 439 aa2.93□□□□□ -1.94
SMC4-220ENST00000488017 EIF2S3LQ2VIR3 472 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms