RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RUFY1Q96T51 708 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 LGR4Q9BXB1 951 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 CUEDC2Q9H467 287 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 RAB20Q9NX57 234 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 FRMD4BQ9Y2L6 1034 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 PCDHGA10Q9Y5H3 936 aa11.66□□□□□ -0.54
TRIM56-204ENST00000487252 ILVBLA1L0T0 632 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 BECN2A8MW95 431 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 KRIT1O00522 736 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 GRID2O43424 1007 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 PAGE1O75459 146 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 NDUFA10O95299 355 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 AK4P27144 223 aaPredicted RBP11.65□□□□□ -0.54
TRIM56-204ENST00000487252 PTPN4P29074 926 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 SRSF11Q05519 484 aaKnown RBP11.65□□□□□ -0.54
TRIM56-204ENST00000487252 CUL2Q13617 745 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 IL11RAQ14626 422 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 MYLK3Q32MK0 819 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.65□□□□□ -0.54
TRIM56-204ENST00000487252 GDPD4Q6W3E5 623 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 INTS8Q75QN2 995 aaKnown RBP11.65□□□□□ -0.54
TRIM56-204ENST00000487252 FJX1Q86VR8 437 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 AOPEPQ8N6M6 819 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 FBXL13Q8NEE6 735 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 RNF31Q96EP0 1072 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 AHCYL2Q96HN2 611 aaKnown RBP11.65□□□□□ -0.54
TRIM56-204ENST00000487252 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 GPR83Q9NYM4 423 aa11.65□□□□□ -0.54
TRIM56-204ENST00000487252 FBN1P35555 2871 aaKnown RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 IGLV3-10A0A075B6K4 115 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 SMTNL1A8MU46 457 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 I6L893 689 aaPredicted RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 M0QYV0 167 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 KCNN4O15554 427 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 MT-ND3P03897 115 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 PAEPP09466 180 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 FGF5P12034 268 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 EDN3P14138 238 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 RPS18P62269 152 aaKnown RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 ELP6Q0PNE2 266 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 BIRC2Q13490 618 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 ZNF761Q86XN6 746 aaPredicted RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 SPC24Q8NBT2 197 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 ARHGEF2Q92974 986 aaKnown RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 CARS2Q9HA77 564 aaKnown RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 DDIT4Q9NX09 232 aa11.64□□□□□ -0.55
TRIM56-204ENST00000487252 G3BP2Q9UN86 482 aaKnown RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 FN1P02751 2386 aaKnown RBP11.64□□□□□ -0.55
TRIM56-204ENST00000487252 FLNAP21333 2647 aaKnown RBP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 ATRQ13535 2644 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 PRRC2AP48634 2157 aaKnown RBP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 CEACAM5P06731 702 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 TPM2P07951 284 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 OR1E1P30953 314 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 GPD2P43304 727 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 LIG3P49916 1009 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 ART1P52961 327 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 SNRPD1P62314 119 aaKnown RBP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 CTBSQ01459 385 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 PNOCQ13519 176 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 PEX6Q13608 980 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 STILQ15468 1287 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 VWA2Q5GFL6 755 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 VWA5B1Q5TIE3 1220 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 SLC30A9Q6PML9 568 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 Q6ZS92 163 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 TFAP2DQ7Z6R9 452 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 TGIF2LYQ8IUE0 185 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 KIAA0895Q8NCT3 520 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 HCAR2Q8TDS4 363 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 HMCESQ96FZ2 354 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 SLC2A13Q96QE2 648 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 SPON2Q9BUD6 331 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 GSX1Q9H4S2 264 aaPredicted RBP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 THAP9Q9H5L6 903 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 MMRN2Q9H8L6 949 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 FAM204AQ9H8W3 233 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 AKIRIN1Q9H9L7 192 aaPredicted RBP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 MCCC2Q9HCC0 563 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 ATP13A1Q9HD20 1204 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 ANLNQ9NQW6 1124 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 DLL4Q9NR61 685 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 HOOK1Q9UJC3 728 aaKnown RBP11.63□□□□□ -0.55
TRIM56-204ENST00000487252 PYCARDQ9ULZ3 195 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 MFHAS1Q9Y4C4 1052 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 PLEKHM1Q9Y4G2 1056 aa11.63□□□□□ -0.55
TRIM56-204ENST00000487252 TSPAN11A1L157 253 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 CFAP69A5D8W1 941 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 ZNF185O15231 689 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 SPAG6O75602 509 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 TMEM63AO94886 807 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 CASP1P29466 404 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 ACADSBP45954 432 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 CDK17Q00537 523 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 STK4Q13043 487 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 TAF5Q15542 800 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms