RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 NCSTNQ92542 709 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 LPGAT1Q92604 370 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 EXT2Q93063 718 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 CCSER2Q9H7U1 834 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 TMEM181Q9P2C4 612 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 UBXN8O00124 270 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 RTN3O95197 1032 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-204ENST00000486995 VNN2O95498 520 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 PRSS56P0CW18 603 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 ZNF26P17031 533 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-204ENST00000486995 GPX3P22352 226 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 RING1Q06587 406 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 TRAP1Q12931 704 aaKnown RBP12.32□□□□□ -0.44
PTCD2-204ENST00000486995 LAMB3Q13751 1172 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 ZNF235Q14590 738 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 LAYNQ6UX15 382 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 HACD2Q6Y1H2 254 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 CFAP52Q8N1V2 620 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 PCSK9Q8NBP7 692 aaKnown RBP12.32□□□□□ -0.44
PTCD2-204ENST00000486995 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-204ENST00000486995 TRIB3Q96RU7 358 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 ATOH8Q96SQ7 321 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 CROTQ9UKG9 612 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 AP4S1Q9Y587 144 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 PTGDR2Q9Y5Y4 395 aa12.32□□□□□ -0.44
PTCD2-204ENST00000486995 HOXB8P17481 243 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 TACR2P21452 398 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 KCNQ1P51787 676 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 STC1P52823 247 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 FOXA1P55317 472 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 CAP1Q01518 475 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 PFKFB4Q16877 469 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 MGAT5BQ3V5L5 792 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 C6orf10Q5SRN2 563 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 C6orf52Q5T4I8 152 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 ALG1LQ6GMV1 187 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 RSPO2Q6UXX9 243 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 SATL1Q86VE3 508 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 MFN1Q8IWA4 741 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 RHEBL1Q8TAI7 183 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 SLCO4A1Q96BD0 722 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 CDKN2AIPNLQ96HQ2 116 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 NSMCE3Q96MG7 304 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 NSUN5Q96P11 429 aaKnown RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 ZIC5Q96T25 663 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 AARSD1Q9BTE6 412 aaKnown RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 POPDC3Q9HBV1 291 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 MID1IP1Q9NPA3 183 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 CATSPERZQ9NTU4 200 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 CNOT11Q9UKZ1 510 aaKnown RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 RIMKLBQ9ULI2 386 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 MTMR11A4FU01 709 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 OR6C75A6NL08 312 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 FAM155AB1AL88 458 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 CA12O43570 354 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 SERPINF2P08697 491 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 OGNP20774 298 aaKnown RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 ILF2Q12905 390 aaKnown RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 TYSND1Q2T9J0 566 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 SETMARQ53H47 684 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 ACBD5Q5T8D3 534 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 ISLR2Q6UXK2 745 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 RETREG3Q86VR2 466 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 CNBD2Q96M20 576 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 ASB2Q96Q27 587 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 SLC39A3Q9BRY0 314 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 TRIM4Q9C037 500 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 TFB2MQ9H5Q4 396 aaKnown RBP12.31□□□□□ -0.44
PTCD2-204ENST00000486995 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 VWA8A3KMH1 1905 aa12.31□□□□□ -0.44
PTCD2-204ENST00000486995 HTTP42858 3142 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 TCRBV3S1A0A5B6 114 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 PGM3O95394 542 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 ZDHHC11BP0C7U3 371 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 HOXD9P28356 352 aaPredicted RBP12.3□□□□□ -0.44
PTCD2-204ENST00000486995 MYBPC1Q00872 1141 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 SAMD4BQ5PRF9 694 aaKnown RBP12.3□□□□□ -0.44
PTCD2-204ENST00000486995 RNF19BQ6ZMZ0 732 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 PHYKPLQ8IUZ5 450 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 LGI2Q8N0V4 545 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 LRTOMTQ8WZ04 291 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 DUS3LQ96G46 650 aaKnown RBP12.3□□□□□ -0.44
PTCD2-204ENST00000486995 SPATA17Q96L03 361 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 ZNF599Q96NL3 588 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 SEMA6AQ9H2E6 1030 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 GIMAP2Q9UG22 337 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 FRMPD3Q5JV73 1810 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 TMEM88BA6NKF7 163 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 AZIN1O14977 448 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 PIP5K1BO14986 540 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 TLR5O60602 858 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 SRP72O76094 671 aaKnown RBP12.3□□□□□ -0.44
PTCD2-204ENST00000486995 NDST3O95803 873 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 TFAP2AP05549 437 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 ELNP15502 786 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms