RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 DGLUCYQ7Z3D6 616 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 TMC3Q7Z5M5 1100 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 MAIP1Q8WWC4 291 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 ATG4AQ8WYN0 398 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 WDR24Q96S15 920 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 TEX101Q9BY14 249 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 CDH19Q9H159 772 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 ABCG8Q9H221 673 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 ARNT2Q9HBZ2 717 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 KLF15Q9UIH9 416 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 PNMA8BQ9ULN7 279 aaPredicted RBP13.15□□□□□ -0.3
SF1-216ENST00000486867 CSNK1G3Q9Y6M4 447 aa13.15□□□□□ -0.3
SF1-216ENST00000486867 A0A0U1RQS6 177 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 C1orf232A0A0U1RR37 186 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 K7ESM1 405 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 CES2O00748 559 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 TNFRSF10CO14798 259 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 CLDN7O95471 211 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 FGF1P05230 155 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 PYGLP06737 847 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 DGKAP23743 735 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 PSMB4P28070 264 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 THOP1P52888 689 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 GDF10P55107 478 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 HNRNPKP61978 463 aaKnown RBP eCLIP13.14□□□□□ -0.31
SF1-216ENST00000486867 BNIP3Q12983 259 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 MSLNQ13421 630 aaPredicted RBP13.14□□□□□ -0.31
SF1-216ENST00000486867 PCSK7Q16549 785 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 P3H1Q32P28 736 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 INAVAQ3KP66 663 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 SIRPB2Q5JXA9 342 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 HENMT1Q5T8I9 393 aaKnown RBP13.14□□□□□ -0.31
SF1-216ENST00000486867 ADAMTSL4Q6UY14 1074 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 RFLNAQ6ZTI6 216 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 SLC25A45Q8N413 288 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 TTC30BQ8N4P2 665 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 FAM71DQ8N9W8 422 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 DEFB124Q8NES8 71 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 DTX3LQ8TDB6 740 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 FUBP1Q96AE4 644 aaKnown RBP13.14□□□□□ -0.31
SF1-216ENST00000486867 PBKQ96KB5 322 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 C19orf43Q9BQ61 176 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 SLC32A1Q9H598 525 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 UBP1Q9NZI7 540 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 HACD3Q9P035 362 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 PYCARDQ9ULZ3 195 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 DRG1Q9Y295 367 aaKnown RBP13.14□□□□□ -0.31
SF1-216ENST00000486867 BTBD3Q9Y2F9 522 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 AAR2Q9Y312 384 aaKnown RBP13.14□□□□□ -0.31
SF1-216ENST00000486867 ZNF711Q9Y462 761 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 DGKBQ9Y6T7 804 aa13.14□□□□□ -0.31
SF1-216ENST00000486867 COL27A1Q8IZC6 1860 aaPredicted RBP13.14□□□□□ -0.31
SF1-216ENST00000486867 FGGP02679 453 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 PCCBP05166 539 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 MYCLP1P12525 358 aaPredicted RBP13.13□□□□□ -0.31
SF1-216ENST00000486867 MSNP26038 577 aaKnown RBP13.13□□□□□ -0.31
SF1-216ENST00000486867 NOVA1P51513 510 aaKnown RBP13.13□□□□□ -0.31
SF1-216ENST00000486867 PPM1JQ5JR12 505 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 ZNF569Q5MCW4 686 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 DENND5AQ6IQ26 1287 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 LYSMD3Q7Z3D4 306 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 SCARF2Q96GP6 870 aaPredicted RBP13.13□□□□□ -0.31
SF1-216ENST00000486867 COX14Q96I36 57 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 WDR92Q96MX6 357 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 CDC6Q99741 560 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 FRMD8Q9BZ67 464 aaPredicted RBP13.13□□□□□ -0.31
SF1-216ENST00000486867 ZFYVE1Q9HBF4 777 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
SF1-216ENST00000486867 FEZ2Q9UHY8 353 aaPredicted RBP13.13□□□□□ -0.31
SF1-216ENST00000486867 OR1A2Q9Y585 309 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 SPO11Q9Y5K1 396 aa13.13□□□□□ -0.31
SF1-216ENST00000486867 ENC1O14682 589 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 GIPC1O14908 333 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 KIF5CO60282 957 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
SF1-216ENST00000486867 KELP23276 732 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 CXCR5P32302 372 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 HMGCLP35914 325 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 CHRNA4P43681 627 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 CDK3Q00526 305 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 IL9RQ01113 521 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 PRPSAP1Q14558 356 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 CYP1B1Q16678 543 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 PSAPL1Q6NUJ1 521 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 GATAD2AQ86YP4 633 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 SDR16C5Q8N3Y7 309 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 PRELID2Q8N945 189 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 ZNF548Q8NEK5 533 aaPredicted RBP13.12□□□□□ -0.31
SF1-216ENST00000486867 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 OR4C6Q8NH72 309 aa13.12□□□□□ -0.31
SF1-216ENST00000486867 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms