RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 C2orf81A6NN90 581 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 BIRC5O15392 142 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 FZD6O60353 706 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 RPP40O75818 363 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 PDHA1P08559 390 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 NEFHP12036 1026 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 TYRP14679 529 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 GABRB3P28472 473 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 OPRD1P41143 372 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 CXCL12P48061 93 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 LEPRP48357 1165 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 CCR3P51677 355 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 MPP1Q00013 466 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 TRAF2Q12933 501 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 GAB4Q2WGN9 574 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 FBXO43Q4G163 708 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 GLT6D1Q7Z4J2 308 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 LCA5Q86VQ0 697 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 ARMC2Q8NEN0 867 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 OR6P1Q8NGX9 317 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 HDAC10Q969S8 669 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 ISG20Q96AZ6 181 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 PHOX2BQ99453 314 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 ELAC2Q9BQ52 826 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 HS3ST2Q9Y278 367 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 ANKRD6Q9Y2G4 727 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 ARL5AQ9Y689 179 aa14.61□□□□□ -0.07
POLR2J3-204ENST00000486319 MYO15AQ9UKN7 3530 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 A0A096LPK6 155 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 K7ERQ8 282 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 KLF11O14901 512 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 SNX3O60493 162 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 SOCS5O75159 536 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 PRKCGP05129 697 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 PABPC1P11940 636 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 GRIA4P48058 902 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 SLC6A11P48066 632 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 EPHB1P54762 984 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 HNRNPH2P55795 449 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 RPL26P61254 145 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 ITIH4Q14624 930 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 USP10Q14694 798 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 ZKSCAN8Q15776 578 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 ZNF528Q3MIS6 628 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 CCDC153Q494R4 210 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 TAF1BQ53T94 588 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 ATXN7L2Q5T6C5 722 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 ARMC12Q5T9G4 340 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 N4BP2L1Q5TBK1 243 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 MRNIPQ6NTE8 343 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 TSSK4Q6SA08 328 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 CMC1Q7Z7K0 106 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 OTUD6BQ8N6M0 293 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 OR2AP1Q8NGE2 309 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 RAB3IL1Q8TBN0 382 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 PDCD6IPQ8WUM4 868 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 TM6SF2Q9BZW4 377 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 PRMT8Q9NR22 394 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 NLE1Q9NVX2 485 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 TLK1Q9UKI8 766 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 SLC39A10Q9ULF5 831 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 PHTF1Q9UMS5 762 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 RPL26L1Q9UNX3 145 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 STARD13Q9Y3M8 1113 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 SPO11Q9Y5K1 396 aa14.6□□□□□ -0.07
POLR2J3-204ENST00000486319 KIF26AQ9ULI4 1882 aaPredicted RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 FAM95CA0A1B0GW59 222 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 HOXC11O43248 304 aaPredicted RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 SMAD6O43541 496 aaKnown RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 EDF1O60869 148 aaKnown RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 ATG13O75143 517 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 C2P06681 752 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 PIRTP0C851 137 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 COL6A2P12110 1019 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 SRCP12931 536 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 LPOP22079 712 aaPredicted RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 PSMA3P25788 255 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 EIF2DP41214 584 aaKnown RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 ABCG1P45844 678 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 CSRP3P50461 194 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 ARSDP51689 593 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 SNRPD1P62314 119 aaKnown RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 BCL2L1Q07817 233 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 FUT11Q495W5 492 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 PPM1JQ5JR12 505 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 ATG16L1Q676U5 607 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 RAPH1Q70E73 1250 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 PTAR1Q7Z6K3 402 aaPredicted RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 CILP2Q8IUL8 1156 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 NAT16Q8N8M0 369 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 CCDC63Q8NA47 563 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 OR13C4Q8NGS5 318 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 GPR150Q8NGU9 434 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 SCG3Q8WXD2 468 aaKnown RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 MYO19Q96H55 970 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 DNAJC1Q96KC8 554 aaKnown RBP14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 TBATAQ96M53 351 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 TSNARE1Q96NA8 513 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 CEP44Q9C0F1 390 aa14.59□□□□□ -0.07
POLR2J3-204ENST00000486319 ATP13A3Q9H7F0 1226 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms