RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 IFNL4K9M1U5 179 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 TSPAN3O60637 253 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 MT-CYBP00156 380 aaPredicted RBP3.75□□□□□ -1.81
GCFC2-209ENST00000486016 DDX5P17844 614 aaKnown RBP3.75□□□□□ -1.81
GCFC2-209ENST00000486016 METAP2P50579 478 aaKnown RBP eCLIP3.75□□□□□ -1.81
GCFC2-209ENST00000486016 TAF11Q15544 211 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 ZC2HC1BQ5TFG8 222 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 HIST2H2BDQ6DRA6 164 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 ZNF497Q6ZNH5 498 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 KCTD8Q6ZWB6 473 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 ADGRG6Q86SQ4 1221 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 TADA2BQ86TJ2 420 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 DSELQ8IZU8 1212 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 SAMD3Q8N6K7 520 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 TRIM58Q8NG06 486 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 SIN3AQ96ST3 1273 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 SH3GL2Q99962 352 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 SYT17Q9BSW7 474 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 FKRPQ9H9S5 495 aa3.75□□□□□ -1.81
GCFC2-209ENST00000486016 BCAT2O15382 392 aaPredicted RBP3.74□□□□□ -1.81
GCFC2-209ENST00000486016 EXTL3O43909 919 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 URODP06132 367 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 KRT2P35908 639 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 NOTCH2Q04721 2471 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 ZNF876PQ49A33 203 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 TXNDC8Q6A555 127 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 SLC35E4Q6ICL7 350 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 BBS12Q6ZW61 710 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 C2CD5Q86YS7 1000 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 SPATA6LQ8N4H0 392 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 PLEKHA4Q9H4M7 779 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 IL1RAPL1Q9NZN1 696 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.74□□□□□ -1.81
GCFC2-209ENST00000486016 HSPB7Q9UBY9 170 aa3.74□□□□□ -1.81
GCFC2-209ENST00000486016 KIAA1210Q9ULL0 1709 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 hCG_1642624A0A1W2PR95 340 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 FTCDO95954 541 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 RRM1P23921 792 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 HOXC13P31276 330 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 GRK6P43250 576 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 MMP14P50281 582 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 ARL4CP56559 192 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 ISL1P61371 349 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 EFNB1P98172 346 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 GTF2H2Q13888 395 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 TCTN1Q2MV58 587 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 FBXO47Q5MNV8 452 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 GPATCH4Q5T3I0 446 aaKnown RBP3.73□□□□□ -1.81
GCFC2-209ENST00000486016 ANO1Q5XXA6 986 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 ZNF772Q68DY9 489 aaPredicted RBP3.73□□□□□ -1.81
GCFC2-209ENST00000486016 GTF2H2CQ6P1K8 395 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 KCTD18Q6PI47 426 aaPredicted RBP3.73□□□□□ -1.81
GCFC2-209ENST00000486016 ZBTB2Q8N680 514 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 C11orf65Q8NCR3 313 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 TNIP2Q8NFZ5 429 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 OR10V1Q8NGI7 309 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 TBC1D20Q96BZ9 403 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 CMKLR1Q99788 373 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 LBHD1Q9BQE6 289 aaPredicted RBP3.73□□□□□ -1.81
GCFC2-209ENST00000486016 GLIS2Q9BZE0 524 aaPredicted RBP3.73□□□□□ -1.81
GCFC2-209ENST00000486016 TKTL2Q9H0I9 626 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 PPP1R3EQ9H7J1 279 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 ITM2CQ9NQX7 267 aa3.73□□□□□ -1.81
GCFC2-209ENST00000486016 IGKV3D-20A0A0C4DH25 116 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 WDR1O75083 606 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 BAG4O95429 457 aaKnown RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 TFP02787 698 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 GALTP07902 379 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 INHBAP08476 426 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 BDKRB2P30411 391 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 GPD2P43304 727 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 HOXA1P49639 335 aaPredicted RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 HSD17B4P51659 736 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 GNB1P62873 340 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 PDE1BQ01064 536 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 GAGE5Q13069 117 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 GAGE6Q13070 117 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 RNPS1Q15287 305 aaKnown RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 PDCD2Q16342 344 aaPredicted RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 SLC45A4Q5BKX6 768 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 PDSS1Q5T2R2 415 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 MAP3K21Q5TCX8 1036 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 METTL2BQ6P1Q9 378 aaKnown RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 CPLX2Q6PUV4 134 aaKnown RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 CEACAM20Q6UY09 585 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 ZCCHC9Q8N567 271 aaKnown RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 CADM4Q8NFZ8 388 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 RHBDF1Q96CC6 855 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 METTL2AQ96IZ6 378 aaKnown RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 HEMGNQ9BXL5 484 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 HINT3Q9NQE9 182 aaKnown RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 C20orf141Q9NUB4 165 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 BEX4Q9NWD9 120 aaPredicted RBP3.72□□□□□ -1.81
GCFC2-209ENST00000486016 FAM118AQ9NWS6 357 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 TMEM160Q9NX00 188 aa3.72□□□□□ -1.81
GCFC2-209ENST00000486016 KRTAP16-1A8MUX0 517 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 TACC1O75410 805 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 IGHV4-39P01824 125 aa3.71□□□□□ -1.82
GCFC2-209ENST00000486016 HMGB1P09429 215 aaKnown RBP3.71□□□□□ -1.82
GCFC2-209ENST00000486016 GNL1P36915 607 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms