RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 GKN2Q86XP6 184 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 PELI3Q8N2H9 469 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 SDR16C5Q8N3Y7 309 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 ARL10Q8N8L6 244 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 Q8N9G6 341 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-215ENST00000485550 ZSCAN1Q8NBB4 408 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 WDR48Q8TAF3 677 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 FNIP1Q8TF40 1166 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 OR1E3Q8WZA6 343 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 FUBP1Q96AE4 644 aaKnown RBP10.6□□□□□ -0.71
HMGN1-215ENST00000485550 CCDC74AQ96AQ1 378 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 ECHDC3Q96DC8 303 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 TBATAQ96M53 351 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 LGR4Q9BXB1 951 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 FGF22Q9HCT0 170 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 MRPL47Q9HD33 250 aaKnown RBP10.6□□□□□ -0.71
HMGN1-215ENST00000485550 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.6□□□□□ -0.71
HMGN1-215ENST00000485550 MAN2B2Q9Y2E5 1009 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 SCINQ9Y6U3 715 aa10.6□□□□□ -0.71
HMGN1-215ENST00000485550 CACNB4O00305 520 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-215ENST00000485550 JMJD7P0C870 316 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 MYBL1P10243 752 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 RARAP10276 462 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 ITIH1P19827 911 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 SSR1P43307 286 aaKnown RBP10.59□□□□□ -0.71
HMGN1-215ENST00000485550 RENBPP51606 427 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 IQCB1Q15051 598 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 AGERQ15109 404 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 PTPRRQ15256 657 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 NFKBIBQ15653 356 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 BOLA3Q53S33 107 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 TMCO4Q5TGY1 634 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 LVRNQ6Q4G3 990 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 TMCO3Q6UWJ1 677 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 DPPA4Q7L190 304 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 POLNQ7Z5Q5 900 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 ZFAND4Q86XD8 727 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 PSTKQ8IV42 348 aaKnown RBP10.59□□□□□ -0.71
HMGN1-215ENST00000485550 PGBD5Q8N414 524 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 LZTR1Q8N653 840 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 FAM46DQ8NEK8 389 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 OR56A4Q8NGH8 313 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 ATL2Q8NHH9 583 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 CCL4L1Q8NHW4 92 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 CSPG4P5Q96PW8 444 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 PSKH2Q96QS6 385 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 GFM1Q96RP9 751 aaKnown RBP10.59□□□□□ -0.71
HMGN1-215ENST00000485550 FUCA2Q9BTY2 467 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 TMEM168Q9H0V1 697 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 THAP2Q9H0W7 228 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 ISCUQ9H1K1 167 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 NOD2Q9HC29 1040 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 CYP4F12Q9HCS2 524 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 GEMIN8Q9NWZ8 242 aaKnown RBP10.59□□□□□ -0.71
HMGN1-215ENST00000485550 SEPT10Q9P0V9 454 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 B4GALT6Q9UBX8 382 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 ACSL6Q9UKU0 697 aa10.59□□□□□ -0.71
HMGN1-215ENST00000485550 PRAMEF33A0A0G2JMD5 474 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 A0A0U1RQS6 177 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-215ENST00000485550 A0A1W2PQM1 296 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 BLACEA4D250 179 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 CFAP69A5D8W1 941 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 B4DGG1 531 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 MAFKO60675 156 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 PRAMEF10O60809 474 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 PEX11BO96011 259 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 RPLP0P05388 317 aaKnown RBP10.58□□□□□ -0.72
HMGN1-215ENST00000485550 PCK1P35558 622 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 ZNF135P52742 658 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-215ENST00000485550 AP1S1P61966 158 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 FANCCQ00597 558 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 TRAF2Q12933 501 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 EIF3IQ13347 325 aaKnown RBP10.58□□□□□ -0.72
HMGN1-215ENST00000485550 DPYSL2Q16555 572 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 HGSNATQ68CP4 663 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 PNCKQ6P2M8 343 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 LUZP1Q86V48 1076 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.58□□□□□ -0.72
HMGN1-215ENST00000485550 TRIM11Q96F44 468 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 RBM15Q96T37 977 aaKnown RBP eCLIP10.58□□□□□ -0.72
HMGN1-215ENST00000485550 STRADBQ9C0K7 418 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 DPEP2Q9H4A9 486 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 WDR26Q9H7D7 661 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 CBX8Q9HC52 389 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 PCDH18Q9HCL0 1135 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 DGKBQ9Y6T7 804 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 MED13Q9UHV7 2174 aa10.58□□□□□ -0.72
HMGN1-215ENST00000485550 SYCE3A1L190 88 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CLEC18AA5D8T8 446 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 GOLGA6CA6NDK9 693 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 GOLGA6BA6NDN3 693 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 D6RAR5 112 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CPP00450 1065 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CD48P09326 243 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 GOLGA6DP0CG33 693 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CTPS1P17812 591 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 KELP23276 732 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 VIPR1P32241 457 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 GJC1P36383 396 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms