RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-240	ENST00000484412	FSCN3	Q9NQT6	498 aa		13.94	□□□□□ -0.18
HDLBP-240	ENST00000484412	SNX12	Q9UMY4	172 aa		13.94	□□□□□ -0.18
HDLBP-240	ENST00000484412	CA5B	Q9Y2D0	317 aa		13.94	□□□□□ -0.18
HDLBP-240	ENST00000484412	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.94	□□□□□ -0.18
HDLBP-240	ENST00000484412	COQ6	Q9Y2Z9	468 aa		13.94	□□□□□ -0.18
HDLBP-240	ENST00000484412	TTLL3	Q9Y4R7	772 aa		13.94	□□□□□ -0.18
HDLBP-240	ENST00000484412	NEMP2	A6NFY4	417 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	ENC1	O14682	589 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	SCAMP1	O15126	338 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	CEP104	O60308	925 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PIAS2	O75928	621 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	SUN1	O94901	812 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	DKK1	O94907	266 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	KCNK5	O95279	499 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	C1S	P09871	688 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	GIMD1	P0DJR0	217 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	CDK4	P11802	303 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	CTPS1	P17812	591 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	FDFT1	P37268	417 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	ETV3	P41162	512 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	GRK6	P43250	576 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	GDF10	P55107	478 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PDE1C	Q14123	709 aa	Predicted RBP	13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	NFATC4	Q14934	902 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	LONRF2	Q1L5Z9	754 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	HS1BP3	Q53T59	392 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	SIRPB2	Q5JXA9	342 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	HENMT1	Q5T8I9	393 aa	Known RBP	13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	DENND5A	Q6IQ26	1287 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	SLC25A45	Q8N413	288 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PAF1	Q8N7H5	531 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PRELID2	Q8N945	189 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	FAM71D	Q8N9W8	422 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	FAM181A	Q8N9Y4	354 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	CCDC110	Q8TBZ0	833 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	FUBP1	Q96AE4	644 aa	Known RBP	13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	NUS1	Q96E22	293 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	COX14	Q96I36	57 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PLEKHG4B	Q96PX9	1271 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	OSBPL9	Q96SU4	736 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	CDC6	Q99741	560 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	FAM83D	Q9H4H8	585 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	TRMT1	Q9NXH9	659 aa	Known RBP	13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PKD2L2	Q9NZM6	624 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	IL17C	Q9P0M4	197 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PCOLCE2	Q9UKZ9	415 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	PYCARD	Q9ULZ3	195 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	ZNF148	Q9UQR1	794 aa		13.93	□□□□□ -0.18
HDLBP-240	ENST00000484412	COL5A1	P20908	1838 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	USP27X	A6NNY8	438 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	AGAP14	A8MT82	685 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412		A8MX80	341 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	PMPCB	O75439	489 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	METTL18	O95568	372 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	SOD1	P00441	154 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	ATP1A1	P05023	1023 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	DGKA	P23743	735 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	THOP1	P52888	689 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	PDE1B	Q01064	536 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	BNIP3	Q12983	259 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	ARMC3	Q5W041	872 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	LINC00523	Q86TU6	105 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	PLA2G15	Q8NCC3	412 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	C1orf54	Q8WWF1	131 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	AP2M1	Q96CW1	435 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	DUSP23	Q9BVJ7	150 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	UBP1	Q9NZI7	540 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	PAK5	Q9P286	719 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	KLF15	Q9UIH9	416 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	CNOT6	Q9ULM6	557 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	CEP250	Q9BV73	2442 aa		13.92	□□□□□ -0.18
HDLBP-240	ENST00000484412	TMEM131	Q92545	1883 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	C1orf232	A0A0U1RR37	186 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412		H3BM21	787 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	AP3B1	O00203	1094 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	CACNB4	O00305	520 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	SH3BP5	O60239	455 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	AP2A1	O95782	977 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	AGT	P01019	485 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	MYCLP1	P12525	358 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	PSMB4	P28070	264 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	CXCR5	P32302	372 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	ACTN2	P35609	894 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	TNNT3	P45378	269 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	HK3	P52790	923 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	CDK16	Q00536	496 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	FOXK2	Q01167	660 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	SEMG2	Q02383	582 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	PPARD	Q03181	441 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	SEMA5A	Q13591	1074 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	GALNT3	Q14435	633 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	PTPRR	Q15256	657 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	TAF1A	Q15573	450 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	INAVA	Q3KP66	663 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	UAP1L1	Q3KQV9	507 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	TPRG1L	Q5T0D9	272 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	LAYN	Q6UX15	382 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	ARHGEF18	Q6ZSZ5	1173 aa		13.91	□□□□□ -0.18
HDLBP-240	ENST00000484412	TTC30B	Q8N4P2	665 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms