RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 ANKRD54Q6NXT1 300 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 DENND1BQ6P3S1 775 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 FAM129CQ86XR2 697 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 TDRPQ86YL5 185 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 TMCO5AQ8N6Q1 288 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 PABPC5Q96DU9 382 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 NAP1L3Q99457 506 aaPredicted RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 IL12RB2Q99665 862 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 IKZF4Q9H2S9 585 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 SNX15Q9NRS6 342 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 RIC8BQ9NVN3 520 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 CEP192Q8TEP8 1941 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 A4D1N5 150 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 PHGDHO43175 533 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 PRAMEF1O95521 474 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 ITGB1P05556 798 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 PTGS1P23219 599 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 IVDP26440 423 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 ECHS1P30084 290 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 SOX18P35713 384 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 ACOT2P49753 483 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 ZRSR1Q15695 479 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 PABPC1LQ4VXU2 614 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 MEX3BQ6ZN04 569 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 ZNF574Q6ZN55 896 aaPredicted RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 TMC6Q7Z403 805 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 KIF18BQ86Y91 864 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 CNTN4Q8IWV2 1026 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 NELFCDQ8IXH7 590 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 GRK7Q8WTQ7 553 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 PCED1BQ96HM7 432 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 RCC1LQ96I51 464 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 SLITRK1Q96PX8 696 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 TMEM30AQ9NV96 361 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 DOCK8Q8NF50 2099 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 hCG_1818297A0A087WSY0 165 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 WDR27A2RRH5 827 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 HUS1O60921 280 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 GARSP41250 739 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 IRX1P78414 480 aaPredicted RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 ZNF658BQ4V348 819 aaPredicted RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 LIN9Q5TKA1 542 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 IYDQ6PHW0 289 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 TEX9Q8N6V9 391 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 HSPH1Q92598 858 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 PIWIL1Q96J94 861 aaKnown RBP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 C7orf26Q96N11 449 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 CHP1Q99653 195 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.79□□□□□ -1.16
TVP23B-203ENST00000482741 SAYSD1Q9NPB0 183 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 TSPAN16Q9UKR8 245 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 AGAP1Q9UPQ3 857 aa7.79□□□□□ -1.16
TVP23B-203ENST00000482741 SLC38A8A6NNN8 435 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 VILLO15195 856 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 BUB1BO60566 1050 aaPredicted RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 SOCS5O75159 536 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 ALDH1A2O94788 518 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 SNX4O95219 450 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 EPOP01588 193 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 MARK3P27448 753 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 ARL3P36405 182 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 MRPL19P49406 292 aaKnown RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 TKTL1P51854 596 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 PPIDQ08752 370 aaKnown RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 MALLQ13021 153 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 MYBPC3Q14896 1274 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 SCARA3Q6AZY7 606 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 THSD4Q6ZMP0 1018 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 FRMD7Q6ZUT3 714 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 TUSC5Q8IXB3 177 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 MYLPFQ96A32 169 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 SERPINB11Q96P15 392 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 CPXM1Q96SM3 734 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 TMLHEQ9NVH6 421 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 DDX18Q9NVP1 670 aaKnown RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 HMGXB4Q9UGU5 601 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 DNPEPQ9ULA0 475 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 DNAJC16Q9Y2G8 782 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 PTRH2Q9Y3E5 179 aaKnown RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 EFCAB8A8MWE9 144 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 RAB27BO00194 218 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 HRO43593 1189 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 SRPRAP08240 638 aaKnown RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 CR2P20023 1033 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 KCNJ5P48544 419 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 HDAC4P56524 1084 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 KHDC1Q4VXA5 237 aaKnown RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 LIAT1Q6ZQX7 453 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 LRRC39Q96DD0 335 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 APOPT1Q96IL0 206 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 HIC2Q96JB3 615 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 SPATA13Q96N96 652 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 FCRL3Q96P31 734 aaPredicted RBP7.78□□□□□ -1.16
TVP23B-203ENST00000482741 TUBGCP5Q96RT8 1024 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 VPS16Q9H269 839 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 TLR9Q9NR96 1032 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 ZNF281Q9Y2X9 895 aa7.78□□□□□ -1.16
TVP23B-203ENST00000482741 HYOU1Q9Y4L1 999 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms