RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CDC14AQ9UNH5 594 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 MTMR6Q9Y217 621 aa5.78□□□□□ -1.48
SF3B1-210ENST00000482158 C1orf226A1L170 272 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 CSH1P0DML2 217 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 CSH2P0DML3 217 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 ACTN2P35609 894 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 PGGT1BP53609 377 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 GALCP54803 685 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 BNC1Q01954 994 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 TRAF3Q13114 568 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 TOMM20Q15388 145 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 ADIPOQQ15848 244 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 AWAT2Q6E213 333 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 TMEM154Q6P9G4 183 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 ELMOD3Q96FG2 381 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 PGAM5Q96HS1 289 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 SRSF8Q9BRL6 282 aaKnown RBP5.77□□□□□ -1.49
SF3B1-210ENST00000482158 CCDC68Q9H2F9 335 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 NDST4Q9H3R1 872 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 FBXL17Q9UF56 701 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 TINAGQ9UJW2 476 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 SESN1Q9Y6P5 492 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 MAU2Q9Y6X3 613 aa5.77□□□□□ -1.49
SF3B1-210ENST00000482158 CPED1A4D0V7 1026 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 NDUFS7O75251 213 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 PGM3O95394 542 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 CLTBP09497 229 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 RPL3P39023 403 aaKnown RBP5.76□□□□□ -1.49
SF3B1-210ENST00000482158 AIMP2Q13155 320 aaKnown RBP5.76□□□□□ -1.49
SF3B1-210ENST00000482158 WTAPQ15007 396 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 ZNF260Q3ZCT1 412 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 PPP6R3Q5H9R7 873 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-210ENST00000482158 RAB41Q5JT25 222 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 DAB2IPQ5VWQ8 1189 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 METTL2BQ6P1Q9 378 aaKnown RBP5.76□□□□□ -1.49
SF3B1-210ENST00000482158 ZNF549Q6P9A3 640 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 ZC3HC1Q86WB0 502 aaKnown RBP5.76□□□□□ -1.49
SF3B1-210ENST00000482158 SRBD1Q8N5C6 995 aaKnown RBP5.76□□□□□ -1.49
SF3B1-210ENST00000482158 SCARB1Q8WTV0 552 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 RND1Q92730 232 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 METTL2AQ96IZ6 378 aaKnown RBP5.76□□□□□ -1.49
SF3B1-210ENST00000482158 SLC25A33Q9BSK2 321 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 SLC9A2Q9UBY0 812 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 PCDHGB4Q9UN71 923 aa5.76□□□□□ -1.49
SF3B1-210ENST00000482158 A0A1W2PQ09 198 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 CDRT15L2A8MXV6 281 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 AKR1B15C9JRZ8 316 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-210ENST00000482158 JRKO75564 520 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 TUBBP07437 444 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 ACADLP28330 430 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 PSMC6P62333 389 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 TDRD12Q587J7 1177 aaKnown RBP5.75□□□□□ -1.49
SF3B1-210ENST00000482158 RILPL1Q5EBL4 403 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 PAPPA-AS1Q5QFB9 102 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 PLEKHS1Q5SXH7 462 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 GGNBP1Q5YKI7 109 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 TYW3Q6IPR3 259 aaKnown RBP5.75□□□□□ -1.49
SF3B1-210ENST00000482158 TSPAN33Q86UF1 283 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 TICAM1Q8IUC6 712 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 RNF168Q8IYW5 571 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-210ENST00000482158 NME8Q8N427 588 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 TXNDC15Q96J42 360 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 NEUROD6Q96NK8 337 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 SMARCAD1Q9H4L7 1026 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 CNGB3Q9NQW8 809 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 SUCLA2Q9P2R7 463 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-210ENST00000482158 PCDHA7Q9UN72 937 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 CLIC4Q9Y696 253 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 TAF1P21675 1872 aa5.75□□□□□ -1.49
SF3B1-210ENST00000482158 CH25HO95992 272 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 RB1P06400 928 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 DDX5P17844 614 aaKnown RBP5.74□□□□□ -1.49
SF3B1-210ENST00000482158 ITGB8P26012 769 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 PIK3CAP42336 1068 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 CAMPP49913 170 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 RAD23BP54727 409 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 TAS2R40P59535 323 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 CHAF1BQ13112 559 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 NAB2Q15742 525 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 C8orf82Q6P1X6 216 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-210ENST00000482158 C9orf47Q6ZRZ4 202 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 TAOK1Q7L7X3 1001 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 EGLN2Q96KS0 407 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 PCGF1Q9BSM1 259 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 CENPOQ9BU64 300 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 SF3B5Q9BWJ5 86 aaKnown RBP5.74□□□□□ -1.49
SF3B1-210ENST00000482158 PLK3Q9H4B4 646 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 MRPL44Q9H9J2 332 aaKnown RBP5.74□□□□□ -1.49
SF3B1-210ENST00000482158 NOX4Q9NPH5 578 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 HIF1ANQ9NWT6 349 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 MTMR10Q9NXD2 777 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 NENFQ9UMX5 172 aa5.74□□□□□ -1.49
SF3B1-210ENST00000482158 FAM90A10PA6NDY2 464 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 ATP2A1O14983 1001 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 DDNO94850 711 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 HOXC6P09630 235 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 C21orf33P30042 268 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 HOXA13P31271 388 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 PCYT1AP49585 367 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms