RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SPASTQ9UBP0 616 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SSX2IPQ9Y2D8 614 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PFASO15067 1338 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GRIN2DO15399 1336 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 A0A1W2PRX2 142 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SRGAP3O43295 1099 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 STX6O43752 255 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 DAB1O75553 588 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ZFPL1O95159 310 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 DIRAS3O95661 229 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 IGKV5-2P06315 115 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ADRA2CP18825 462 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 IFNAR2P48551 515 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GMPSP49915 693 aaPredicted RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 LIG4P49917 911 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CCR3P51677 355 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PNLIPRP2P54317 469 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 JAG1P78504 1218 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 HMGN5P82970 282 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 BAATQ14032 418 aaPredicted RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 RPS6KA1Q15418 735 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 RBM20Q5T481 1227 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 KCTD9Q7L273 389 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CHST3Q7LGC8 479 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ELMOD2Q8IZ81 293 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD53Q8N9V6 530 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 RBM15BQ8NDT2 890 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 OR2T34Q8NGX1 318 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GDAP1L1Q96MZ0 367 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CCDC106Q9BWC9 280 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 HOMER3Q9NSC5 361 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 FAM212BQ9NTI7 297 aaPredicted RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 THAP1Q9NVV9 213 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 OSGIN1Q9UJX0 560 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CTNND2Q9UQB3 1225 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 DRG1Q9Y295 367 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 R3HDM2Q9Y2K5 976 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 TP53BP1Q12888 1972 aaPredicted RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 DNAH3Q8TD57 4116 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 FEZF1A0PJY2 475 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ZAR1LA6NP61 321 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 TSPAN4O14817 238 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 TOX4O94842 621 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 KCNK5O95279 499 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 PAHP00439 452 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 LCATP04180 440 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 GNAT2P19087 354 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 FUT1P19526 365 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 STAT2P52630 851 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 SP140Q13342 867 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 AASDHQ4L235 1098 aaPredicted RBP3.37□□□□□ -1.87
SMC6-208ENST00000481708 CAVIN4Q5BKX8 364 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 FAM160B1Q5W0V3 765 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 CAMKMTQ7Z624 323 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 XYLT1Q86Y38 959 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 DCP2Q8IU60 420 aaKnown RBP3.37□□□□□ -1.87
SMC6-208ENST00000481708 SPPL2CQ8IUH8 684 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 KIAA2013Q8IYS2 634 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 NHLRC2Q8NBF2 726 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 UXS1Q8NBZ7 420 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ZNF483Q8TF39 744 aaPredicted RBP3.37□□□□□ -1.87
SMC6-208ENST00000481708 HASPINQ8TF76 798 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 SAT2Q96F10 170 aaPredicted RBP3.37□□□□□ -1.87
SMC6-208ENST00000481708 ALG14Q96F25 216 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ADAD1Q96M93 576 aaKnown RBP3.37□□□□□ -1.87
SMC6-208ENST00000481708 TRIB1Q96RU8 372 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ABHD6Q9BV23 337 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 DEFB129Q9H1M3 183 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 COQ10BQ9H8M1 238 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 PANK3Q9H999 370 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 GLRX2Q9NS18 164 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 MTMR4Q9NYA4 1195 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 HAO2Q9NYQ3 351 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 EHD2Q9NZN4 543 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 CFAP97Q9P2B7 532 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 TNFSF13BQ9Y275 285 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ANGPTL3Q9Y5C1 460 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 PCDHB2Q9Y5E7 798 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.37□□□□□ -1.87
SMC6-208ENST00000481708 TCAF2A6NFQ2 919 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ZSCAN5BA6NJL1 495 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 CGB1A6NKQ9 187 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ZNF263O14978 683 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ZNF185O15231 689 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 PALMO75781 387 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 GBAP04062 536 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 UROSP10746 265 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 FCER1AP12319 257 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 NCF1P14598 390 aaPredicted RBP3.37□□□□□ -1.87
SMC6-208ENST00000481708 MMP9P14780 707 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 MGAT1P26572 445 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ARSFP54793 590 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 UCP2P55851 309 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 RAC3P60763 192 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 ACTR1AP61163 376 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 SHC2P98077 582 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 CCDC142Q17RM4 750 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 COL28A1Q2UY09 1125 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 IGSF11Q5DX21 431 aa3.37□□□□□ -1.87
SMC6-208ENST00000481708 TMEM81Q6P7N7 255 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms