RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	SORD	Q00796	357 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	UBE3A	Q05086	875 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	EFR3A	Q14156	821 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	TCTN1	Q2MV58	587 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZNF766	Q5HY98	468 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	STXBP5	Q5T5C0	1151 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	LCTL	Q6UWM7	567 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	LDHAL6A	Q6ZMR3	332 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	BBS12	Q6ZW61	710 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZBTB2	Q8N680	514 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	OR2AK2	Q8NG84	335 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	ALG14	Q96F25	216 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	MPHOSPH8	Q99549	860 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	TKTL2	Q9H0I9	626 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	PLEKHA5	Q9HAU0	1116 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	PCDH9	Q9HC56	1237 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	KLHL1	Q9NR64	748 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	C20orf141	Q9NUB4	165 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	MCM9	Q9NXL9	1143 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	CNOT7	Q9UIV1	285 aa	Known RBP	3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	TCF19	Q9Y242	345 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	COMMD10	Q9Y6G5	202 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	GOLGA6L10	A0A0M3HER8	536 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173		A0A1W2PS18	150 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	AKR1B15	C9JRZ8	316 aa	Predicted RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	EXTL3	O43909	919 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	KRT5	P13647	590 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	MYOD1	P15172	320 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	CORO1A	P31146	461 aa	Known RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	CDKN1A	P38936	164 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	HAL	P42357	657 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	GPD2	P43304	727 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	NOV	P48745	357 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	CLCNKA	P51800	687 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	HNRNPH2	P55795	449 aa	Known RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	PDE1B	Q01064	536 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	HIST2H2AC	Q16777	129 aa	Predicted RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	CCDC96	Q2M329	555 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	LINGO2	Q7L985	606 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	HAPLN4	Q86UW8	402 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	KMT5C	Q86Y97	462 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	RNF113B	Q8IZP6	322 aa	Known RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	C1orf87	Q8N0U7	546 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	SPATA6L	Q8N4H0	392 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	METTL27	Q8N6F8	245 aa	Predicted RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	C11orf65	Q8NCR3	313 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	SLC24A4	Q8NFF2	622 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	HUS1B	Q8NHY5	278 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	HMGCLL1	Q8TB92	370 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	TRIM63	Q969Q1	353 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	MTERF1	Q99551	399 aa	Known RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	GLIS2	Q9BZE0	524 aa	Predicted RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	INTS2	Q9H0H0	1204 aa	Known RBP	3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	TMEM30A	Q9NV96	361 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	GPR52	Q9Y2T5	361 aa		3.15	□□□□□ -1.91
CCNL1-223	ENST00000481173	TEX13C	A0A0J9YWL9	993 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	FAM72C	H0Y354	149 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	EIF3F	O00303	357 aa	Predicted RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	TF	P02787	698 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	AZU1	P20160	251 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	BDKRB2	P30411	391 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	METAP2	P50579	478 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	UFM1	P61960	85 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	RNPS1	Q15287	305 aa	Known RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	GRAMD1B	Q3KR37	738 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	FAM72A	Q5TYM5	149 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	FAM72D	Q6L9T8	149 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZNF852	Q6ZMS4	543 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	KCTD8	Q6ZWB6	473 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	LRRC8D	Q7L1W4	858 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	FAM72B	Q86X60	149 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	MAGEC3	Q8TD91	643 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	TAS1R2	Q8TE23	839 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZNF501	Q96CX3	271 aa	Predicted RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	PABPC5	Q96DU9	382 aa	Known RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	ZNF583	Q96ND8	569 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	PPP1R3E	Q9H7J1	279 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	PPCS	Q9HAB8	311 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	MMP25	Q9NPA2	562 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	HINT3	Q9NQE9	182 aa	Known RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	BEX4	Q9NWD9	120 aa	Predicted RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	FAF1	Q9UNN5	650 aa	Predicted RBP	3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	AMDHD2	Q9Y303	409 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	OR2W1	Q9Y3N9	320 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	LOXL2	Q9Y4K0	774 aa		3.14	□□□□□ -1.91
CCNL1-223	ENST00000481173	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	LILRA5	A6NI73	299 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	DVL1	O14640	695 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	SEC14L5	O43304	696 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	PRSS1	P07477	247 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	MAOA	P21397	527 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	CNTF	P26441	200 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	GGT5	P36269	586 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	DVL1P1	P54792	670 aa	Predicted RBP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	SREBF2	Q12772	1141 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	PPFIA1	Q13136	1202 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	NAE1	Q13564	534 aa		3.13	□□□□□ -1.91
CCNL1-223	ENST00000481173	SLC1A5	Q15758	541 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms