RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ARCQ7LC44 396 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 KANSL1Q7Z3B3 1105 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 GATAD2AQ86YP4 633 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 FAM114A1Q8IWE2 563 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 WDTC1Q8N5D0 677 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 EID2Q8N6I1 236 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 LSM14AQ8ND56 463 aaKnown RBP6.59□□□□□ -1.35
LRCH3-216ENST00000481048 HNRNPLLQ8WVV9 542 aaKnown RBP6.59□□□□□ -1.35
LRCH3-216ENST00000481048 NT5C3BQ969T7 300 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 NXPE2Q96DL1 559 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 SYT3Q9BQG1 590 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 CRACR2AQ9BSW2 395 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 FAM204AQ9H8W3 233 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 ARHGEF38Q9NXL2 777 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 VPS28Q9UK41 221 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 SARDHQ9UL12 918 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 STAP1Q9ULZ2 295 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 HS3ST4Q9Y661 456 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 HELZ2Q9BYK8 2649 aaKnown RBP6.59□□□□□ -1.36
LRCH3-216ENST00000481048 ILVBLA1L0T0 632 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 NEMP2A6NFY4 417 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 EIF4E1BA6NMX2 242 aaKnown RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 DRGXA6NNA5 263 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 M0QYT0 321 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 PLK4O00444 970 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 WNT9AO14904 365 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 RRP8O43159 456 aaKnown RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 RTN2O75298 545 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 DAB1O75553 588 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 ZNF20P17024 532 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 SLC9A1P19634 815 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 HNRNPA2B1P22626 353 aaKnown RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 PON1P27169 355 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 AKT2P31751 481 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 CHRNA3P32297 505 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 CDH5P33151 784 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 THBS2P35442 1172 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 USP8P40818 1118 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 EIF2S3P41091 472 aaKnown RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 ABCG1P45844 678 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 RECQLP46063 649 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 CXCR3P49682 368 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 PPP2CBP62714 309 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 PPP2CAP67775 309 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 PITX1P78337 314 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 IL9RQ01113 521 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 CNTN1Q12860 1018 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 NME3Q13232 169 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 SLC25A52Q3SY17 297 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 PRAMEF14Q5SWL7 426 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 HES3Q5TGS1 186 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 ZNF783Q6ZMS7 281 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 SPATS2Q86XZ4 545 aaKnown RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 CREBRFQ8IUR6 639 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 ARHGEF39Q8N4T4 335 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 DCAF4L2Q8NA75 395 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 MLKLQ8NB16 471 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 TMEM145Q8NBT3 493 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 TMEM35BQ8NCS4 154 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 PPP1R16AQ96I34 528 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 HAPLN3Q96S86 360 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 NPY6RQ99463 290 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 SYNCQ9H7C4 482 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 USP29Q9HBJ7 922 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 DYRK4Q9NR20 520 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 KLHL11Q9NVR0 708 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 VANGL2Q9ULK5 521 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 HS3ST3A1Q9Y663 406 aa6.58□□□□□ -1.36
LRCH3-216ENST00000481048 SMG1Q96Q15 3661 aaKnown RBP6.58□□□□□ -1.36
LRCH3-216ENST00000481048 LRRK1Q38SD2 2015 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 IGLV3-10A0A075B6K4 115 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 SYNJ2BP-COX16A0A087WUM0 186 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 FAM149AA5PLN7 773 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 FOXN3O00409 490 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 GRAP2O75791 330 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 LSM8O95777 96 aaKnown RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 GP1BAP07359 652 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 RHOCP08134 193 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 THEGLP0DJG4 465 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ALPPL2P10696 532 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 SRCP12931 536 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 DGKAP23743 735 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 OR1E1P30953 314 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 MAT2AP31153 395 aaKnown RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ACTN2P35609 894 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 ETFBP38117 255 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 MTIF2P46199 727 aaKnown RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 DUSP3P51452 185 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 TAS2R38P59533 333 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 HNRNPKP61978 463 aaKnown RBP eCLIP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 UBE2HP62256 183 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 DEUP1Q05D60 604 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 TARDBPQ13148 414 aaKnown RBP eCLIP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 DNAJC3Q13217 504 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 MAN2A1Q16706 1144 aa6.57□□□□□ -1.36
LRCH3-216ENST00000481048 TPD52L1Q16890 204 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-216ENST00000481048 PTPN20Q4JDL3 420 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms