RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 JMJD7P0C870 316 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ALDH4A1P30038 563 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 VIPR1P32241 457 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 CSF2RBP32927 897 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 PRKCIP41743 596 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 GNPDA1P46926 289 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 AP1S1P61966 158 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 POLR2LP62875 67 aaKnown RBP13.28□□□□□ -0.28
PTPN7-212ENST00000480836 CTBSQ01459 385 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 PTSQ03393 145 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 TYRO3Q06418 890 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 RFTN1Q14699 578 aaPredicted RBP13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ASIC2Q16515 512 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ANO6Q4KMQ2 910 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 TMCO4Q5TGY1 634 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 HGSNATQ68CP4 663 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 SLC30A9Q6PML9 568 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ZNF761Q86XN6 746 aaPredicted RBP13.28□□□□□ -0.28
PTPN7-212ENST00000480836 OR6C4Q8NGE1 309 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ZDHHC1Q8WTX9 485 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 HSPH1Q92598 858 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ZNF653Q96CK0 615 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 NUS1Q96E22 293 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 NUDCD1Q96RS6 583 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 MGME1Q9BQP7 344 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 STRADBQ9C0K7 418 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ISCUQ9H1K1 167 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ABCG8Q9H221 673 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
PTPN7-212ENST00000480836 MYO6Q9UM54 1294 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 SLC17A4Q9Y2C5 497 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 SDK2Q58EX2 2172 aa13.28□□□□□ -0.28
PTPN7-212ENST00000480836 ASH1LQ9NR48 2969 aaKnown RBP13.28□□□□□ -0.28
PTPN7-212ENST00000480836 EIF3CLB5ME19 914 aaKnown RBP13.27□□□□□ -0.29
PTPN7-212ENST00000480836 RNF8O76064 485 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PGLSO95336 258 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 MAP3K6O95382 1288 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PRLP01236 227 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 FAM87AP0C7U9 286 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 LIPCP11150 499 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 ADCY8P40145 1251 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 SLC25A11Q02978 314 aaKnown RBP13.27□□□□□ -0.29
PTPN7-212ENST00000480836 NFATC3Q12968 1075 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 ARHGEF7Q14155 803 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 NR1D2Q14995 579 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 CLCA4Q14CN2 919 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 TBR1Q16650 682 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PHF19Q5T6S3 580 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PSTKQ8IV42 348 aaKnown RBP13.27□□□□□ -0.29
PTPN7-212ENST00000480836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.27□□□□□ -0.29
PTPN7-212ENST00000480836 ATL2Q8NHH9 583 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 SGF29Q96ES7 293 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 SCRN2Q96FV2 425 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 ZNF599Q96NL3 588 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 MCCC1Q96RQ3 725 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-212ENST00000480836 WDR24Q96S15 920 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 EIF3CQ99613 913 aaKnown RBP13.27□□□□□ -0.29
PTPN7-212ENST00000480836 TRIM4Q9C037 500 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PCDH18Q9HCL0 1135 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PHTF1Q9UMS5 762 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PPIL1Q9Y3C6 166 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
PTPN7-212ENST00000480836 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-212ENST00000480836 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 SLC28A2O43868 658 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 CPNE6O95741 557 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 CPP00450 1065 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 PCK1P35558 622 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 ARSEP51690 589 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 NR1I3Q14994 352 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 DOK6Q6PKX4 331 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 LZTR1Q8N653 840 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 TEX26Q8N6G2 289 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 ANKRD20A12PQ8NF67 263 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 SCARF2Q96GP6 870 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-212ENST00000480836 CCDC74BQ96LY2 380 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 THAP2Q9H0W7 228 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.26□□□□□ -0.29
PTPN7-212ENST00000480836 TRNAU1APQ9NX07 287 aaKnown RBP13.26□□□□□ -0.29
PTPN7-212ENST00000480836 OCIAD1Q9NX40 245 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 CNOT6Q9ULM6 557 aaKnown RBP13.26□□□□□ -0.29
PTPN7-212ENST00000480836 PRKAB1Q9Y478 270 aa13.26□□□□□ -0.29
PTPN7-212ENST00000480836 IGHV1OR21-1A0A087WYE8 117 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 A0A1B0GTH6 734 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 H3BRJ5 948 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 KELP23276 732 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 RENBPP51606 427 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 DSC2Q02487 901 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 NIPAL4Q0D2K0 466 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 ZNF235Q14590 738 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 IQCB1Q15051 598 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 BOLA3Q53S33 107 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 LRRC66Q68CR7 880 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 MARK2Q7KZI7 788 aaKnown RBP13.25□□□□□ -0.29
PTPN7-212ENST00000480836 PIM3Q86V86 326 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 ARRDC2Q8TBH0 407 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 FAM71BQ8TC56 605 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 NKD1Q969G9 470 aa13.25□□□□□ -0.29
PTPN7-212ENST00000480836 CMKLR1Q99788 373 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms