RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SPATA19Q7Z5L4 167 aa9.55□□□□□ -0.88
VEGFA-212ENST00000480614 AKAP14Q86UN6 197 aa9.55□□□□□ -0.88
VEGFA-212ENST00000480614 C17orf64Q86WR6 236 aa9.55□□□□□ -0.88
VEGFA-212ENST00000480614 SRFBP1Q8NEF9 429 aaKnown RBP9.55□□□□□ -0.88
VEGFA-212ENST00000480614 TATDN2Q93075 761 aa9.55□□□□□ -0.88
VEGFA-212ENST00000480614 CLIP3Q96DZ5 547 aa9.55□□□□□ -0.88
VEGFA-212ENST00000480614 EBNA1BP2Q99848 306 aaKnown RBP9.55□□□□□ -0.88
VEGFA-212ENST00000480614 ACSS3Q9H6R3 686 aa9.55□□□□□ -0.88
VEGFA-212ENST00000480614 ABI3Q9P2A4 366 aa9.55□□□□□ -0.88
VEGFA-212ENST00000480614 CDH3P22223 829 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 CDK9P50750 372 aaKnown RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PSMA8Q8TAA3 256 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 CEP41Q9BYV8 373 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 NXF3Q9H4D5 531 aaKnown RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 UPB1Q9UBR1 384 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 COL1A2P08123 1366 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ARHGEF33A8MVX0 844 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 TLX3O43711 291 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 FGBP02675 491 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 GLRA2P23416 452 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ALDH3A2P51648 485 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ATN1P54259 1190 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MTX3Q5HYI7 312 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ZNF730Q6ZMV8 503 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MEIOBQ8N635 442 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PIK3R3Q92569 461 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MBOAT7Q96N66 472 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 COPS8Q99627 209 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MAF1Q9H063 256 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 IL1RAPQ9NPH3 570 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PHPT1Q9NRX4 125 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 LARS2Q15031 903 aaKnown RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 LCN1P1Q5VSP4 162 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 AAGABQ6PD74 315 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 LEMD2Q8NC56 503 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PGLYRP2Q96PD5 576 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 HOPXQ9BPY8 73 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PDCD2LQ9BRP1 358 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 DEPDC5O75140 1603 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 EP300Q09472 2414 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 METTL21EPA6NDL7 271 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 DDX3XO00571 662 aaKnown RBP eCLIP9.54□□□□□ -0.881e-8■□□□□ 11.2
VEGFA-212ENST00000480614 LIASO43766 372 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 TOP3BO95985 862 aaKnown RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 THRBP10828 461 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 HDCP19113 662 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MAT2BQ9NZL9 334 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 IFT172Q9UG01 1749 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MAP2K7O14733 419 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 KMOO15229 486 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PSIP1O75475 530 aaKnown RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ALDH4A1P30038 563 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 RPL38P63173 70 aaKnown RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MEA1Q16626 185 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 C17orf50Q8WW18 174 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ULBP1Q9BZM6 244 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PCBD2Q9H0N5 130 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ZFP14Q9HCL3 533 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PCDHB1Q9Y5F3 818 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 AHCTF1Q8WYP5 2266 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 RFX5P48382 616 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 SEC23AQ15436 765 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ANKRD52Q8NB46 1076 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PRRG4Q9BZD6 226 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 CEMIPQ8WUJ3 1361 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 VEGFAP15692 232 aaPredicted RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MANFP55145 182 aaKnown RBP9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PPATQ06203 517 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 SWI5Q1ZZU3 235 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ULK3Q6PHR2 472 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 SLC30A10Q6XR72 485 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 CERS6Q6ZMG9 384 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MCEMP1Q8IX19 187 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 POC5Q8NA72 575 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 SLC35C1Q96A29 364 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 MEMO1Q9Y316 297 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 SMU1Q2TAY7 513 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 SULT1C3Q6IMI6 304 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ARMCX6Q7L4S7 300 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ZSWIM2Q8NEG5 633 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 CPA4Q9UI42 421 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 ABHD14A-ACY1A0A1B0GW23 586 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 UNC5CO95185 931 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 PTPRNQ16849 979 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 C16orf59Q7L2K0 433 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 GALNT7Q86SF2 657 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 RHOJQ9H4E5 214 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 GVINP1Q7Z2Y8 2422 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 TFPIP10646 304 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 TYSND1Q2T9J0 566 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 RUNDC3AQ59EK9 446 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 OR4L1Q8NH43 312 aa9.54□□□□□ -0.88
VEGFA-212ENST00000480614 AKAP12Q02952 1782 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CST1P01037 141 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 GABRB2P47870 512 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms