RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CEP70Q8NHQ1 597 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 FAM222BQ8WU58 562 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 THAP4Q8WY91 577 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 FBXL8Q96CD0 374 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 SIN3AQ96ST3 1273 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 ELAC2Q9BQ52 826 aaKnown RBP2.99□□□□□ -1.93
HPS3-205ENST00000478525 CRB3Q9BUF7 120 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 TRIM15Q9C019 465 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 MAP3K20Q9NYL2 800 aaKnown RBP2.99□□□□□ -1.93
HPS3-205ENST00000478525 GRHPRQ9UBQ7 328 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 GDAQ9Y2T3 454 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 DERAQ9Y315 318 aa2.99□□□□□ -1.93
HPS3-205ENST00000478525 IGLV5-45A0A087WSX0 123 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 FAM90A7PA6NKC0 464 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 FAM90A22PA8MWA6 464 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 FAM90A12PA8MX19 464 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 FAM90A23PA8MXZ1 464 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 BCAT2O15382 392 aaPredicted RBP2.98□□□□□ -1.93
HPS3-205ENST00000478525 CIDEAO60543 219 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 ZNF26P17031 533 aaPredicted RBP2.98□□□□□ -1.93
HPS3-205ENST00000478525 AGAP20933 346 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 MAOAP21397 527 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 EFNA5P52803 228 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 PDE1BQ01064 536 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 ZNF234Q14588 700 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 KRT24Q2M2I5 525 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 JMJD6Q6NYC1 403 aaPredicted RBP2.98□□□□□ -1.93
HPS3-205ENST00000478525 FAM171BQ6P995 826 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 TRPT1Q86TN4 253 aaKnown RBP2.98□□□□□ -1.93
HPS3-205ENST00000478525 FAM160B2Q86V87 743 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 P2RY8Q86VZ1 359 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 TMTC1Q8IUR5 882 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 SLC35F3Q8IY50 421 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 ZNF440Q8IYI8 595 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 ZNF473Q8WTR7 871 aaKnown RBP2.98□□□□□ -1.93
HPS3-205ENST00000478525 FCAMRQ8WWV6 532 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 SH3KBP1Q96B97 665 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 LINC00479Q96M42 142 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 MTERF1Q99551 399 aaKnown RBP2.98□□□□□ -1.93
HPS3-205ENST00000478525 STN1Q9H668 368 aaKnown RBP2.98□□□□□ -1.93
HPS3-205ENST00000478525 ARNT2Q9HBZ2 717 aa2.98□□□□□ -1.93
HPS3-205ENST00000478525 ARHGEF9O43307 516 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 TK1P04183 234 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 CD48P09326 243 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 RRM1P23921 792 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 SERPINB3P29508 390 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 BDKRB2P30411 391 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 HOXC8P31273 242 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 AARSP49588 968 aaKnown RBP eCLIP2.97□□□□□ -1.93
HPS3-205ENST00000478525 EEF1A1P68104 462 aaKnown RBP2.97□□□□□ -1.93
HPS3-205ENST00000478525 RPL24P83731 157 aaKnown RBP2.97□□□□□ -1.93
HPS3-205ENST00000478525 TMEM187Q14656 261 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 CTXN3Q4LDR2 81 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 SGO1Q5FBB7 561 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 EEF1A1P5Q5VTE0 462 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 BEST2Q8NFU1 509 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 OR52I2Q8NH67 350 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 MROH8Q9H579 483 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 MMP25Q9NPA2 562 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 SAYSD1Q9NPB0 183 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 DNAJC16Q9Y2G8 782 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 C2CD2Q9Y426 696 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 LOXL2Q9Y4K0 774 aa2.97□□□□□ -1.93
HPS3-205ENST00000478525 TMEM202A6NGA9 273 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 PSMD14O00487 310 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 ANP32CO43423 234 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 SYNGR3O43761 229 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 CAND2O75155 1236 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 FAM155BO75949 473 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 SORBS2O94875 1100 aaKnown RBP2.96□□□□□ -1.94
HPS3-205ENST00000478525 KRT18P05783 430 aaKnown RBP2.96□□□□□ -1.94
HPS3-205ENST00000478525 MYL1P05976 194 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 VEGFAP15692 232 aaPredicted RBP2.96□□□□□ -1.94
HPS3-205ENST00000478525 ADD2P35612 726 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 RAD23BP54727 409 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 BLMHQ13867 455 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 TCTE1Q5JU00 501 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 SERTAD4-AS1Q5TG53 156 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 ZNF790Q6PG37 636 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 RAD9BQ6WBX8 426 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 RBMS3Q6XE24 437 aaKnown RBP2.96□□□□□ -1.94
HPS3-205ENST00000478525 LINGO2Q7L985 606 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 RUBCNQ92622 972 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 PIGTQ969N2 578 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 SDCCAG3Q96C92 435 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 LINGO1Q96FE5 620 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 VGLL1Q99990 258 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 MAGEE1Q9HCI5 957 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 CCDC177Q9NQR7 707 aaPredicted RBP2.96□□□□□ -1.94
HPS3-205ENST00000478525 SNTG1Q9NSN8 517 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 CACNG5Q9UF02 275 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 SUFUQ9UMX1 484 aa2.96□□□□□ -1.94
HPS3-205ENST00000478525 SH2D7A6NKC9 451 aaPredicted RBP2.95□□□□□ -1.94
HPS3-205ENST00000478525 PEX12O00623 359 aa2.95□□□□□ -1.94
HPS3-205ENST00000478525 TCERG1O14776 1098 aaKnown RBP2.95□□□□□ -1.94
HPS3-205ENST00000478525 ZNHIT1O43257 154 aa2.95□□□□□ -1.94
HPS3-205ENST00000478525 SETSIPP0DME0 302 aa2.95□□□□□ -1.94
HPS3-205ENST00000478525 DPEP1P16444 411 aa2.95□□□□□ -1.94
HPS3-205ENST00000478525 MRPS5P82675 430 aaKnown RBP2.95□□□□□ -1.94
HPS3-205ENST00000478525 SPOCK1Q08629 439 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms