RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 LRRC61Q9BV99 259 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 SCNM1Q9BWG6 230 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 SLC13A1Q9BZW2 595 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 ABCG8Q9H221 673 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 WDR26Q9H7D7 661 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 KLQ9UEF7 1012 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 CD84Q9UIB8 345 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 DNPEPQ9ULA0 475 aa15.57■□□□□ 0.08
HMGA1-206ENST00000478214 C1orf232A0A0U1RR37 186 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 TCRBV7S2A1N4TA0A589 114 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 GOLGA6CA6NDK9 693 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 GOLGA6BA6NDN3 693 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 NRDCO43847 1150 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 GCATO75600 419 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 DKK1O94907 266 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 PTMAP06454 111 aaKnown RBP15.56■□□□□ 0.08
HMGA1-206ENST00000478214 HOXC4P09017 264 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-206ENST00000478214 GOLGA6DP0CG33 693 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 ALPPL2P10696 532 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 TSHRP16473 764 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 HK3P52790 923 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 SRP54P61011 504 aaKnown RBP15.56■□□□□ 0.08
HMGA1-206ENST00000478214 TCEA2Q15560 299 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 HS1BP3Q53T59 392 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 RAET1GQ6H3X3 334 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 DARS2Q6PI48 645 aaKnown RBP15.56■□□□□ 0.08
HMGA1-206ENST00000478214 KDELC1Q6UW63 502 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 RD3Q7Z3Z2 195 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 HEATR4Q86WZ0 1026 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 ATL2Q8NHH9 583 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 OR1E3Q8WZA6 343 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 SCAMP4Q969E2 229 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 AP2M1Q96CW1 435 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 PDXPQ96GD0 296 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 FCRL5Q96RD9 977 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 CLPBQ9H078 707 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 FGF22Q9HCT0 170 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 GOLGA6AQ9NYA3 693 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 NLGN3Q9NZ94 848 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 SPASTQ9UBP0 616 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 FAM153AQ9UHL3 310 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 TRHDEQ9UKU6 1024 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 CSNK1G3Q9Y6M4 447 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 CHD8Q9HCK8 2581 aa15.56■□□□□ 0.08
HMGA1-206ENST00000478214 TPRP12270 2363 aaKnown RBP15.55■□□□□ 0.08
HMGA1-206ENST00000478214 TDRD6O60522 2096 aaKnown RBP15.55■□□□□ 0.08
HMGA1-206ENST00000478214 GOLGA6L9A6NEM1 432 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 KCNN4O15554 427 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 RASGRP1O95267 797 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 NDST3O95803 873 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 SOD1P00441 154 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 CELA2BP08218 269 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-206ENST00000478214 MYF5P13349 255 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 CKMT2P17540 419 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 KELP23276 732 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 ACADVLP49748 655 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 BLKP51451 505 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 WNT3AP56704 352 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 DPTQ07507 201 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 KLF1Q13351 362 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-206ENST00000478214 DEFB133Q30KQ1 61 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 ZNF765Q7L2R6 523 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 LYSMD3Q7Z3D4 306 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 OR56A4Q8NGH8 313 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 AGAP2Q99490 1192 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 TEX101Q9BY14 249 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 MRPL40Q9NQ50 206 aaKnown RBP15.55■□□□□ 0.08
HMGA1-206ENST00000478214 PHPT1Q9NRX4 125 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-206ENST00000478214 RSPH14Q9UHP6 348 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 KLK13Q9UKR3 277 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 SHOC2Q9UQ13 582 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 R3HDM2Q9Y2K5 976 aaKnown RBP15.55■□□□□ 0.08
HMGA1-206ENST00000478214 PPP2R2CQ9Y2T4 447 aa15.55■□□□□ 0.08
HMGA1-206ENST00000478214 COL5A1P20908 1838 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-206ENST00000478214 LMO7DNF2Z398 122 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 MYCLP1P12525 358 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-206ENST00000478214 TEAD1P28347 426 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 GPR1P46091 355 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 CDK3Q00526 305 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 ANKRD20A2Q5SQ80 823 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 MEI1Q5TIA1 1274 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 ANKRD20A1Q5TYW2 823 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 ANKRD20A3Q5VUR7 823 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 CCDC70Q6NSX1 233 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 DHRS13Q6UX07 377 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 NRSN1Q8IZ57 195 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 TTC13Q8NBP0 860 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 EID2BQ96D98 161 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 MRGPRX2Q96LB1 330 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 APOLD1Q96LR9 279 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 TBATAQ96M53 351 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 WDR24Q96S15 920 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 FERMT1Q9BQL6 677 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 GORASP1Q9BQQ3 440 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 DUSP23Q9BVJ7 150 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 RIOK2Q9BVS4 552 aaKnown RBP15.54■□□□□ 0.08
HMGA1-206ENST00000478214 GBA3Q9H227 469 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 ZFYVE1Q9HBF4 777 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 USP29Q9HBJ7 922 aa15.54■□□□□ 0.08
HMGA1-206ENST00000478214 MAGEE1Q9HCI5 957 aa15.54■□□□□ 0.08
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