RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 TMEM259Q4ZIN3 620 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 SPANXN3Q5MJ09 141 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 MFSD4BQ5TF39 518 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 C22orf39Q6P5X5 142 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 ADGRD1Q6QNK2 874 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 CYS1Q717R9 158 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 OR2AP1Q8NGE2 309 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 LRRC8CQ8TDW0 803 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 CKAP2Q8WWK9 683 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 CYTH2Q99418 400 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 TRMT61BQ9BVS5 477 aaKnown RBP14.83□□□□□ -0.04
LMNA-213ENST00000473598 TRABDQ9H4I3 376 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 CHRAC1Q9NRG0 131 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 NKIRAS1Q9NYS0 192 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 MOCS1Q9NZB8 636 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 SLCO3A1Q9UIG8 710 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 TRIM33Q9UPN9 1127 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 ERVW-1Q9UQF0 538 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 PCDHGC4Q9Y5F7 938 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 RAI2Q9Y5P3 530 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 NUMBLQ9Y6R0 609 aa14.83□□□□□ -0.04
LMNA-213ENST00000473598 C19orf67A6NJJ6 358 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 PRPF4O43172 522 aaKnown RBP eCLIP14.82□□□□□ -0.04
LMNA-213ENST00000473598 IGSF6O95976 241 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 KRT15P19012 456 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 MAPK8P45983 427 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 CD97P48960 835 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 SNRPD1P62314 119 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 HTR4Q13639 388 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 GALNT3Q14435 633 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 EFTUD2Q15029 972 aaKnown RBP eCLIP14.82□□□□□ -0.048e-7■■■■■ 32.8
LMNA-213ENST00000473598 LIN52Q52LA3 116 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 GRAMD4Q6IC98 578 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 PKN3Q6P5Z2 889 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 CES3Q6UWW8 571 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 PPHLN1Q8NEY8 458 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 PTCD2Q8WV60 388 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 WDR60Q8WVS4 1066 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 FCRL3Q96P31 734 aaPredicted RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 UHRF1Q96T88 793 aaPredicted RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 PAFAH2Q99487 392 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 TNKS2Q9H2K2 1166 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 MRM3Q9HC36 420 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 MLXIPLQ9NP71 852 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 EVLQ9UI08 416 aaPredicted RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 CHKBQ9Y259 395 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 MYO10Q9HD67 2058 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 ANHXE9PGG2 379 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 GSRP00390 522 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 PRLP01236 227 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 ATP5BP06576 529 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 CA4P22748 312 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 ADRA1DP25100 572 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 GJA4P35212 333 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 VASPP50552 380 aaPredicted RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 TRAF2Q12933 501 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 DLG2Q15700 870 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 ANKRD20A4Q4UJ75 823 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 TRMT10BQ6PF06 316 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 GJD3Q8N144 294 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 PCDH20Q8N6Y1 951 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 TTC8Q8TAM2 541 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 CYB5D2Q8WUJ1 264 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 ZNF669Q96BR6 464 aaPredicted RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 MRRFQ96E11 262 aaKnown RBP14.82□□□□□ -0.04
LMNA-213ENST00000473598 MFSD3Q96ES6 412 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 MRGPRX3Q96LB0 322 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 RANBP9Q96S59 729 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 CIPCQ9C0C6 399 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 TCAF1Q9Y4C2 921 aa14.82□□□□□ -0.04
LMNA-213ENST00000473598 MUC22E2RYF6 1773 aaPredicted RBP14.81□□□□□ -0.04
LMNA-213ENST00000473598 ZCWPW2A0A1B0GU75 182 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.81□□□□□ -0.04
LMNA-213ENST00000473598 ARNTLO00327 626 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 PIAS1O75925 651 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 SRPRAP08240 638 aaKnown RBP14.81□□□□□ -0.04
LMNA-213ENST00000473598 DLDP09622 509 aaKnown RBP14.81□□□□□ -0.04
LMNA-213ENST00000473598 NNMTP40261 264 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 OPRD1P41143 372 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 HPCAP84074 193 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 MESP2Q0VG99 397 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.81□□□□□ -0.044e-6■■■■□ 21
LMNA-213ENST00000473598 OR6K2Q8NGY2 324 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 DENND1AQ8TEH3 1009 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 SORCS1Q8WY21 1168 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 GRAMD1AQ96CP6 724 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 ZNF778Q96MU6 729 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 KCNK12Q9HB15 430 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 TBCCD1Q9NVR7 557 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 ELOVL2Q9NXB9 296 aa14.81□□□□□ -0.04
LMNA-213ENST00000473598 SMG5Q9UPR3 1016 aaKnown RBP14.81□□□□□ -0.04
LMNA-213ENST00000473598 HEATR9A2RTY3 570 aa14.8□□□□□ -0.04
LMNA-213ENST00000473598 FAM159BA6NKW6 160 aa14.8□□□□□ -0.04
LMNA-213ENST00000473598 TCP11X1B4DZS4 312 aa14.8□□□□□ -0.04
LMNA-213ENST00000473598 PRRT4C9JH25 899 aa14.8□□□□□ -0.04
LMNA-213ENST00000473598 FZD6O60353 706 aa14.8□□□□□ -0.04
LMNA-213ENST00000473598 HNRNPCP07910 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
LMNA-213ENST00000473598 GM2AP17900 193 aa14.8□□□□□ -0.04
LMNA-213ENST00000473598 NMBRP28336 390 aa14.8□□□□□ -0.04
LMNA-213ENST00000473598 EIF2DP41214 584 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms