RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 DCAF17Q5H9S7 520 aaPredicted RBP10.21□□□□□ -0.77
CDHR3-209ENST00000472116 BRMS1LQ5PSV4 323 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 PPP1R3BQ86XI6 285 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 ZNF354CQ86Y25 554 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 DRC7Q8IY82 874 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 CEP57L1Q8IYX8 460 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 CHTF18Q8WVB6 975 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 TM9SF4Q92544 642 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 CCDC47Q96A33 483 aaKnown RBP10.21□□□□□ -0.77
CDHR3-209ENST00000472116 ZYG11BQ9C0D3 744 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 TTYH3Q9C0H2 523 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 BRD8Q9H0E9 1235 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 EPB41L1Q9H4G0 881 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 PCDH12Q9NPG4 1184 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 SIDT1Q9NXL6 827 aaKnown RBP10.21□□□□□ -0.77
CDHR3-209ENST00000472116 ACTL7AQ9Y615 435 aa10.21□□□□□ -0.77
CDHR3-209ENST00000472116 DCHS2Q6V1P9 2916 aa10.21□□□□□ -0.78
CDHR3-209ENST00000472116 CFAP69A5D8W1 941 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 MED7O43513 233 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 PRICKLE3O43900 615 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-209ENST00000472116 RECQL5O94762 991 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-209ENST00000472116 MAP3K6O95382 1288 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 ELFN1P0C7U0 828 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 EPHA4P54764 986 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 RHOAP61586 193 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 RPS18P62269 152 aaKnown RBP10.2□□□□□ -0.78
CDHR3-209ENST00000472116 NFATC2Q13469 925 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 GRM3Q14832 879 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 VWA5B1Q5TIE3 1220 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 HGSNATQ68CP4 663 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 BNC2Q6ZN30 1099 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-209ENST00000472116 MED25Q71SY5 747 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 UBR7Q8N806 425 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 TMEM102Q8N9M5 508 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-209ENST00000472116 HCAR2Q8TDS4 363 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 SLC37A2Q8TED4 501 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 SGSM3Q96HU1 749 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 TMX3Q96JJ7 454 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 NT5C1BQ96P26 610 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 SLC2A13Q96QE2 648 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 SMAD5Q99717 465 aaKnown RBP10.2□□□□□ -0.78
CDHR3-209ENST00000472116 LGR4Q9BXB1 951 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-209ENST00000472116 TRIM8Q9BZR9 551 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 ASNSD1Q9NWL6 643 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 SUFUQ9UMX1 484 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 ATP8A1Q9Y2Q0 1164 aa10.2□□□□□ -0.78
CDHR3-209ENST00000472116 TRBV23OR9-2A0A075B6M9 112 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 SPAG6O75602 509 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 GRAP2O75791 330 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 EDN3P14138 238 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 LPOP22079 712 aaPredicted RBP10.19□□□□□ -0.78
CDHR3-209ENST00000472116 TRIM23P36406 574 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 MMP12P39900 470 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 ADCY8P40145 1251 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 SEPHS1P49903 392 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 ART1P52961 327 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 IL10RAQ13651 578 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 ACOX1Q15067 660 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 TAF5Q15542 800 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDHR3-209ENST00000472116 PNCKQ6P2M8 343 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 TMEM110Q86TL2 294 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 PPM1KQ8N3J5 372 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 ZADH2Q8N4Q0 377 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 CASKIN2Q8WXE0 1202 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 C1orf74Q96LT6 269 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 USP28Q96RU2 1077 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 ZSWIM1Q9BR11 485 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 PDE7BQ9NP56 450 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 TMEM51Q9NW97 253 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 STAP1Q9ULZ2 295 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 MFHAS1Q9Y4C4 1052 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 SNX10Q9Y5X0 201 aa10.19□□□□□ -0.78
CDHR3-209ENST00000472116 MN1Q10571 1320 aaPredicted RBP10.18□□□□□ -0.78
CDHR3-209ENST00000472116 IGLV3-10A0A075B6K4 115 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 GOLGA6CA6NDK9 693 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 GOLGA6BA6NDN3 693 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 GOLGA6L3A6NEY3 463 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 BUB1O43683 1085 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 RASSF9O75901 435 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 TMCC1O94876 653 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 PIGNO95427 931 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 CD160O95971 181 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 GOLGA6DP0CG33 693 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 FGF5P12034 268 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 SLC2A4P14672 509 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 ACVRL1P37023 503 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 SNX16P57768 344 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 RAPSNQ13702 412 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 ZNF630Q2M218 657 aaPredicted RBP10.18□□□□□ -0.78
CDHR3-209ENST00000472116 CBWD6Q4V339 395 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 CBWD3Q5JTY5 395 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 CBWD5Q5RIA9 395 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 DENND1BQ6P3S1 775 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 FAM173BQ6P4H8 233 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 BRAT1Q6PJG6 821 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 LEKR1Q6ZMV7 388 aa10.18□□□□□ -0.78
CDHR3-209ENST00000472116 KCNMB4Q86W47 210 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms