RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ASPDHA6ND91 283 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 GOLGA6L9A6NEM1 432 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FAM72CH0Y354 149 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SNAP23O00161 211 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 TAF4O00268 1085 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 IFRD1O00458 451 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 TNPO2O14787 897 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 CAPN9O14815 690 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 EDIL3O43854 480 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FTCDO95954 541 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 HNRNPA1P09651 372 aaKnown RBP eCLIP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 IFIT1P09914 478 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 IRF1P10914 325 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FGF5P12034 268 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 MYOD1P15172 320 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 DDX5P17844 614 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 CD53P19397 219 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 RRM1P23921 792 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 CNTFP26441 200 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 BDKRB2P30411 391 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 CORO1AP31146 461 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 DDIT3P35638 169 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 GNL1P36915 607 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 IL15P40933 162 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 METAP2P50579 478 aaKnown RBP eCLIP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 CRIP2P52943 208 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 RAD23BP54727 409 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 KRTAP10-1P60331 282 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 UFM1P61960 85 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 GALNT2Q10471 571 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 NAE1Q13564 534 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 C2orf68Q2NKX9 166 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SLC45A4Q5BKX6 768 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 KCNT1Q5JUK3 1230 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 CEP85LQ5SZL2 805 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FAM72AQ5TYM5 149 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FAM72DQ6L9T8 149 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF280DQ6N043 979 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SLC26A9Q7LBE3 791 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 NFE4Q86UQ8 179 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FAM72BQ86X60 149 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 KMT5CQ86Y97 462 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 EPHX4Q8IUS5 362 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ANKRD18AQ8IVF6 992 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 WDR63Q8IWG1 891 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 KLHDC8BQ8IXV7 354 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 PCDH20Q8N6Y1 951 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ANKRD42Q8N9B4 389 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SLC24A4Q8NFF2 622 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 DMBX1Q8NFW5 382 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 MAGEC3Q8TD91 643 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ABTB1Q969K4 478 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 KLHL29Q96CT2 875 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF501Q96CX3 271 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ZBTB10Q96DT7 871 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 KIF1BPQ96EK5 621 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ALG14Q96F25 216 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 UBXN10Q96LJ8 280 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 KLHL15Q96M94 604 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF583Q96ND8 569 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 PCYT2Q99447 389 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 CMKLR1Q99788 373 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FUZQ9BT04 418 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 IFIH1Q9BYX4 1025 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 GLIS2Q9BZE0 524 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 NDST4Q9H3R1 872 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 PLEKHA4Q9H4M7 779 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 FBRSL1Q9HCM7 1045 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 MMP25Q9NPA2 562 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 GPR108Q9NPR9 543 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SCRT2Q9NQ03 307 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 HINT3Q9NQE9 182 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 MPP6Q9NZW5 540 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SLC25A10Q9UBX3 287 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 POU2F3Q9UKI9 436 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 PADI1Q9ULC6 663 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 TBX20Q9UMR3 447 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 A4GNTQ9UNA3 340 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 GAB2Q9UQC2 676 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 ERVK-11Q9UQG0 969 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 OR2W1Q9Y3N9 320 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 LSM4Q9Y4Z0 139 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 SCINQ9Y6U3 715 aa1.41□□□□□ -2.18
UBXN4-207ENST00000471246 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 LILRA5A6NI73 299 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 VCYO14598 125 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 DVL1O14640 695 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 EGFP01133 1207 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 APOHP02749 345 aaPredicted RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 POLBP06746 335 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 HOXB5P09067 269 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 COX7A2P14406 83 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 GM2AP17900 193 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TIMP3P35625 211 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 GABRB2P47870 512 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 ATP12AP54707 1039 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 DVL1P1P54792 670 aaPredicted RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 LINC01547P58512 204 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms