RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 CHORDC1Q9UHD1 332 aaPredicted RBP5.58□□□□□ -1.52
RBM39-227ENST00000470563 EXO1Q9UQ84 846 aaKnown RBP5.58□□□□□ -1.52
RBM39-227ENST00000470563 RAI2Q9Y5P3 530 aa5.58□□□□□ -1.52
RBM39-227ENST00000470563 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
RBM39-227ENST00000470563 DDX49Q9Y6V7 483 aaKnown RBP5.58□□□□□ -1.52
RBM39-227ENST00000470563 SETD1AO15047 1707 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 NALCNQ8IZF0 1738 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 ABCC4O15439 1325 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 TMEM131LA2VDJ0 1609 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 HSPB2A8KAH6 182 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 KLRF2D3W0D1 207 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 HSPB6O14558 160 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 GJB3O75712 270 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 SLC25A12O75746 678 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 REC8O95072 547 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 TPM3P06753 285 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 MMP2P08253 660 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 TMEM11P17152 192 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 ITGAXP20702 1163 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 MCM3P25205 808 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 SHMT1P34896 483 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 KRT20P35900 424 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 EIF2DP41214 584 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 TMPOP42166 694 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 RASSF2P50749 326 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 KLF10Q13118 480 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 FRG1Q14331 258 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 DRAP1Q14919 205 aaPredicted RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 DAZAP2Q15038 168 aaPredicted RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 PPP2R5BQ15173 497 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 HSPB2Q16082 182 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 ENTPD8Q5MY95 495 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 GARNL3Q5VVW2 1013 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 KIAA1614Q5VZ46 1190 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 KRT79Q5XKE5 535 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 GPR139Q6DWJ6 353 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 RPUSD3Q6P087 351 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 TMCO3Q6UWJ1 677 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 CFAP77Q6ZQR2 320 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 SEPT14Q6ZU15 432 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 PATL1Q86TB9 770 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 SFTPA2Q8IWL1 248 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 MCEMP1Q8IX19 187 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 KIAA2013Q8IYS2 634 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 ADGRF4Q8IZF3 695 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 BOLLQ8N9W6 283 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 BEST2Q8NFU1 509 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 JAKMIP2Q96AA8 810 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 OR2A14Q96R47 310 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 PLEKHF1Q96S99 279 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 BAG1Q99933 345 aaPredicted RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 MXRA8Q9BRK3 442 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 API5Q9BZZ5 524 aaKnown RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 WDR26Q9H7D7 661 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 MVB12BQ9H7P6 319 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 LTB4R2Q9NPC1 389 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 THSD1Q9NS62 852 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 WSB2Q9NYS7 404 aaPredicted RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 UBA2Q9UBT2 640 aaPredicted RBP5.57□□□□□ -1.52
RBM39-227ENST00000470563 RPS6KA6Q9UK32 745 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 PCDHGB4Q9UN71 923 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 HS3ST3A1Q9Y663 406 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 A3GALT2U3KPV4 340 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 ARHGEF40Q8TER5 1519 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 NPATQ14207 1427 aa5.57□□□□□ -1.52
RBM39-227ENST00000470563 FAM208AQ9UK61 1670 aaKnown RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 ERCC6L2Q5T890 1561 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 FAM237AA0A1B0GTK4 181 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 A0A1W2PQ09 198 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 LRRC3CA6NJW4 275 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 MASP2O00187 686 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 WNT9BO14905 357 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 TLR2O60603 784 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 ENTPD3O75355 529 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 LETM1O95202 739 aaPredicted RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 IFNA2P01563 188 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 RB1P06400 928 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 ZNF182P17025 639 aaPredicted RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 DDX5P17844 614 aaKnown RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 MYF6P23409 242 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 ATP5F1P24539 256 aaPredicted RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 CXCR3P49682 368 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 SNX16P57768 344 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 GHRHRQ02643 423 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 ST3GAL1Q11201 340 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 ZNF66Q6ZN08 573 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 ANKRD23Q86SG2 305 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 GPR150Q8NGU9 434 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 TRPC4APQ8TEL6 797 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 PIGOQ8TEQ8 1089 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 PRPF31Q8WWY3 499 aaKnown RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 LRRC59Q96AG4 307 aaKnown RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 PABPC5Q96DU9 382 aaKnown RBP5.56□□□□□ -1.52
RBM39-227ENST00000470563 BBS4Q96RK4 519 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 AGAP2Q99490 1192 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 MXD3Q9BW11 206 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 B3GNT4Q9C0J1 378 aa5.56□□□□□ -1.52
RBM39-227ENST00000470563 TMEM45AQ9NWC5 275 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms