RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SP110Q9HB58 689 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 SPON1Q9HCB6 807 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-209ENST00000470026 KCTD3Q9Y597 815 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 A0A1B0GTW7 788 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 ATP6AP2A0A1C7CYW4 349 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 OR51F1A6NGY5 319 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TRIM64CA6NLI5 447 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 NME4O00746 187 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 ATP6AP2O75787 350 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 EPOP01588 193 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 OGNP20774 298 aaKnown RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 CD52P31358 61 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 ATP6V0D1P61421 351 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 CYP2R1Q6VVX0 501 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TFAP2DQ7Z6R9 452 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 ZNF598Q86UK7 904 aaKnown RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 PTGR2Q8N8N7 351 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TSPAN14Q8NG11 270 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 FEM1CQ96JP0 617 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TBATAQ96M53 351 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 UPF3AQ9H1J1 476 aaKnown RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 OCEL1Q9H607 264 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 SDR39U1Q9NRG7 319 aaPredicted RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 PNPLA3Q9NST1 481 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 THEGQ9P2T0 379 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 AK5Q9Y6K8 562 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 ANKRD36A6QL64 1941 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 FAM92AA1XBS5 289 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 MOXD2PA6NHM9 499 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 F8W810 466 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 CCL22O00626 93 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 AZIN1O14977 448 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 OAZ2O95190 189 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 GOT2P00505 430 aaKnown RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TSPAN8P19075 237 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 SLC5A2P31639 672 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 CDH13P55290 713 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 NKX3-2P78367 333 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 PRKCQQ04759 706 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 FOXM1Q08050 763 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 ITKQ08881 620 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 BIRC2Q13490 618 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 SEMA3AQ14563 771 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 OR4D1Q15615 310 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TYSND1Q2T9J0 566 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 LCN8Q6JVE9 175 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 LAYNQ6UX15 382 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 CXCL17Q6UXB2 119 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TRPV1Q8NER1 839 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 HM13Q8TCT9 377 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TSPEARQ8WU66 669 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TWIST2Q8WVJ9 160 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 CANT1Q8WVQ1 401 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TFAP2CQ92754 450 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 PABPC5Q96DU9 382 aaKnown RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 FUBP3Q96I24 572 aaKnown RBP eCLIP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TCF12Q99081 682 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 SLC39A3Q9BRY0 314 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TUBB1Q9H4B7 451 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 NOL11Q9H8H0 719 aaKnown RBP13.64□□□□□ -0.23
BRCA1-209ENST00000470026 HSFX1Q9UBD0 423 aa13.64□□□□□ -0.23
BRCA1-209ENST00000470026 TRIM64A6NGJ6 449 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 ZNF839A8K0R7 811 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 DLGAP1O14490 977 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 TMCC1O94876 653 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 GLP2RO95838 553 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 FGF1P05230 155 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 OR4Q2P0C623 313 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 PRR35P0CG20 571 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 CAPN3P20807 821 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 PBX3P40426 434 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 BNIP2Q12982 314 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 SERINC3Q13530 473 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 PARP15Q460N3 678 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 GNASQ5JWF2 1037 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 ALG1LQ6GMV1 187 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 OGFOD2Q6N063 350 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 SLC15A3Q8IY34 581 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 MIER2Q8N344 545 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 ATP6V0D2Q8N8Y2 350 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 OR52K2Q8NGK3 314 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 IGSF8Q969P0 613 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 BTN2A3PQ96KV6 586 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 CIB1Q99828 191 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
BRCA1-209ENST00000470026 FBXO44Q9H4M3 255 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 GMPR2Q9P2T1 348 aaKnown RBP13.63□□□□□ -0.23
BRCA1-209ENST00000470026 MYRFQ9Y2G1 1151 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 CRYL1Q9Y2S2 319 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 H3BMM5 538 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 PPP6CO00743 305 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 PIP5K1BO14986 540 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms