RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 STIP1P31948 543 aaKnown RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 HMGCLP35914 325 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 GRK6P43250 576 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 SPINT3P49223 89 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 SEMG2Q02383 582 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 EIF2B5Q13144 721 aaKnown RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 MSLNQ13421 630 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PDE1CQ14123 709 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PTK2BQ14289 1009 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 ACOX1Q15067 660 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PTPRRQ15256 657 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PCSK7Q16549 785 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 INAVAQ3KP66 663 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 ZNF569Q5MCW4 686 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 FAM182AQ5T1J6 154 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PDPK2PQ6A1A2 396 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 DENND5AQ6IQ26 1287 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PNCKQ6P2M8 343 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 RANBP10Q6VN20 620 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 Q6ZVL8 140 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PID1Q7Z2X4 250 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PELI3Q8N2H9 469 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 TTC30BQ8N4P2 665 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PAF1Q8N7H5 531 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PRELID2Q8N945 189 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PLA2G15Q8NCC3 412 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 ZNF548Q8NEK5 533 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 IPMKQ8NFU5 416 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 ACTRT1Q8TDG2 376 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 FUBP1Q96AE4 644 aaKnown RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 SCARF2Q96GP6 870 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PLEKHG4BQ96PX9 1271 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 WDR24Q96S15 920 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 OSBPL9Q96SU4 736 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 NAP1L3Q99457 506 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 FRMD8Q9BZ67 464 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 EIF2B3Q9NR50 452 aaKnown RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 UBP1Q9NZI7 540 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 FEZ2Q9UHY8 353 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 PNMA8BQ9ULN7 279 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 AAR2Q9Y312 384 aaKnown RBP8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 SPO11Q9Y5K1 396 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 DGKBQ9Y6T7 804 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 MYLKQ15746 1914 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 BPTFQ12830 3046 aa8.28□□□□□ -1.08
TRAPPC3-206ENST00000469757 CNOT1A5YKK6 2376 aaKnown RBP8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 GOLGA6CA6NDK9 693 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 GOLGA6BA6NDN3 693 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 H3BM21 787 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 CACNB4O00305 520 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 PPFIA2O75334 1257 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 SUN1O94901 812 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 METTL18O95568 372 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 AP2A1O95782 977 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 GOLGA6DP0CG33 693 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 GIMD1P0DJR0 217 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 TCP1P17987 556 aaKnown RBP8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 KELP23276 732 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 PSMA3P25788 255 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 CXCR5P32302 372 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 FDFT1P37268 417 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 CHRNA4P43681 627 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 THOP1P52888 689 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 HNRNPKP61978 463 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 CDK3Q00526 305 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 SEMA5AQ13591 1074 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 PRPSAP1Q14558 356 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 INPP5AQ14642 412 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 PARP6Q2NL67 630 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 ALG11Q2TAA5 492 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 PAPD7Q5XG87 772 aaKnown RBP8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 C4orf22Q6V702 233 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 ARHGEF18Q6ZSZ5 1173 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 ERMP1Q7Z2K6 904 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 TMC3Q7Z5M5 1100 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 HEATR4Q86WZ0 1026 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 ATL2Q8NHH9 583 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 COG1Q8WTW3 980 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 BTN2A2Q8WVV5 523 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 C1orf54Q8WWF1 131 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 PDXPQ96GD0 296 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 COX14Q96I36 57 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 WDR92Q96MX6 357 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 APOOQ9BUR5 198 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 LRRC61Q9BV99 259 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 ABCG8Q9H221 673 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 LRRC40Q9H9A6 602 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 ZFYVE1Q9HBF4 777 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 FGF22Q9HCT0 170 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 RAD18Q9NS91 495 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 SMOXQ9NWM0 555 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 TRMT1Q9NXH9 659 aaKnown RBP8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 GOLGA6AQ9NYA3 693 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 NLGN3Q9NZ94 848 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 PKD2L2Q9NZM6 624 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 VPS18Q9P253 973 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 KLF15Q9UIH9 416 aa8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 DRG1Q9Y295 367 aaKnown RBP8.27□□□□□ -1.09
TRAPPC3-206ENST00000469757 SLC17A4Q9Y2C5 497 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms