RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 HADHAP40939 763 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 HPCAP84074 193 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SERINC3Q13530 473 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 DNAL1Q4LDG9 190 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ATXN7L2Q5T6C5 722 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ACAD11Q709F0 780 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 CILP2Q8IUL8 1156 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 RAB3IL1Q8TBN0 382 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 PTERQ96BW5 349 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 PPP1R14BQ96C90 147 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 CMTM5Q96DZ9 223 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 POLR1EQ9GZS1 481 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 TMEM248Q9NWD8 314 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 MIA3Q5JRA6 1907 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 A0A1B0GTL3 188 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 PSMD3O43242 534 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 COCHO43405 550 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 LDB2O43679 373 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 IL1BP01584 269 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 S100BP04271 92 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 MRPS22P82650 360 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 RALGDSQ12967 914 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 GPR17Q13304 367 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ART3Q13508 389 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 TRIP10Q15642 601 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 GRAMD1BQ3KR37 738 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 FSCBQ5H9T9 825 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 KLC3Q6P597 504 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 RNF111Q6ZNA4 994 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF554Q86TJ5 538 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF683Q8IZ20 524 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SLC35B4Q969S0 331 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 NMD3Q96D46 503 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ERLEC1Q96DZ1 483 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SMG9Q9H0W8 520 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 DNAJC28Q9NX36 388 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 POMPQ9Y244 141 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 FCF1Q9Y324 198 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SH3GLB1Q9Y371 365 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 VCANP13611 3396 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 CD3EAPO15446 510 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 GPC4O75487 556 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 GLP2RO95838 553 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 SERPINF2P08697 491 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ATXN1LP0C7T5 689 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 GFAPP14136 432 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 HOXC13P31276 330 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ACTR3P61158 418 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PLIN5Q00G26 463 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 GNA12Q03113 381 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PRKAA1Q13131 559 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TMED1Q13445 227 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PLEKHG6Q3KR16 790 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PLA2G4EQ3MJ16 856 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 MMEL1Q495T6 779 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 LRRC73Q5JTD7 316 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 STXBP5Q5T5C0 1151 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 MFSD4BQ5TF39 518 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 RNF219Q5W0B1 726 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 KIAA0930Q6ICG6 404 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF549Q6P9A3 640 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TPGS1Q6ZTW0 290 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 DDIASQ8IXT1 998 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 SMYD1Q8NB12 490 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF296Q8WUU4 475 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 MYLIPQ8WY64 445 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 FUBP3Q96I24 572 aaKnown RBP eCLIP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CINPQ9BW66 212 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 SEMA4BQ9NPR2 832 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ARHGAP26Q9UNA1 814 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TBC1D30Q9Y2I9 924 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TIMM22Q9Y584 194 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 COPG1Q9Y678 874 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 COMMD10Q9Y6G5 202 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PRRG1O14668 218 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 GPR37O15354 613 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CACNG3O60359 315 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 E2F6O75461 281 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 S1PR4O95977 384 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 RHOCP08134 193 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 RAG1P15918 1043 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 XRCC1P18887 633 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PEX2P28328 305 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 MZF1P28698 734 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 GJA8P48165 433 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 THOP1P52888 689 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 FOXA1P55317 472 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 DSG1Q02413 1049 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PLOD1Q02809 727 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 SULT2A1Q06520 285 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 C4orf46Q504U0 113 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 AGKQ53H12 422 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 FAM26DQ5JW98 314 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TXNDC8Q6A555 127 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 MSANTD2Q6P1R3 559 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CYP2R1Q6VVX0 501 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TAS2R42Q7RTR8 314 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms