RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 TMEM63AO94886 807 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 IL7RP16871 459 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 PBX3P40426 434 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 HNRNPH2P55795 449 aaKnown RBP5.35□□□□□ -1.55
XRN1-207ENST00000468894 RPL36AP83881 106 aaKnown RBP5.35□□□□□ -1.55
XRN1-207ENST00000468894 CEBPZQ03701 1054 aaKnown RBP5.35□□□□□ -1.55
XRN1-207ENST00000468894 ILF3Q12906 894 aaKnown RBP eCLIP5.35□□□□□ -1.55
XRN1-207ENST00000468894 GGNBP1Q5YKI7 109 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 KCTD18Q6PI47 426 aaPredicted RBP5.35□□□□□ -1.55
XRN1-207ENST00000468894 TSSK4Q6SA08 328 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 CCNI2Q6ZMN8 369 aaPredicted RBP5.35□□□□□ -1.55
XRN1-207ENST00000468894 CCDC13Q8IYE1 715 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 ZNF441Q8N8Z8 693 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 MMABQ96EY8 250 aaPredicted RBP5.35□□□□□ -1.55
XRN1-207ENST00000468894 IL17FQ96PD4 163 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 PKP4Q99569 1192 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 PLSCR4Q9NRQ2 329 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 CNTNAP2Q9UHC6 1331 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 ZNF587BE7ETH6 402 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 BSGP35613 385 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 F2RL1P55085 397 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 KRTAP10-9P60411 292 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 OLIG2Q13516 323 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 FRG1Q14331 258 aaKnown RBP5.34□□□□□ -1.55
XRN1-207ENST00000468894 CCNG2Q16589 344 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 TMEM116Q8NCL8 245 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 SPATA20Q8TB22 786 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 ETNPPLQ8TBG4 499 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 SORCS1Q8WY21 1168 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 FAM149B1Q96BN6 582 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 C7orf26Q96N11 449 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 SH3GL2Q99962 352 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 RETREG1Q9H6L5 497 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 EBF2Q9HAK2 575 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 KCNS2Q9ULS6 477 aa5.34□□□□□ -1.55
XRN1-207ENST00000468894 FAM237AA0A1B0GTK4 181 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 A0A1W2PRG0 241 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 DENND3A2RUS2 1198 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 IFITM10A6NMD0 228 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 EIF3CLB5ME19 914 aaKnown RBP5.33□□□□□ -1.56
XRN1-207ENST00000468894 TULP2O00295 520 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 DDNO94850 711 aaPredicted RBP5.33□□□□□ -1.56
XRN1-207ENST00000468894 NKX2-2O95096 273 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 SPARCP09486 303 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 KRT10P13645 584 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 PAX3P23760 479 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 CLCNKAP51800 687 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 ZBTB17Q13105 803 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 KRT24Q2M2I5 525 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 DPCR1Q3MIW9 517 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 ZNF280DQ6N043 979 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 FAM122CQ6P4D5 195 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 CYP20A1Q6UW02 462 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 DPPA4Q7L190 304 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 SATL1Q86VE3 508 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 TDRD7Q8NHU6 1098 aaKnown RBP5.33□□□□□ -1.56
XRN1-207ENST00000468894 NEK9Q8TD19 979 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 TMEM19Q96HH6 336 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 MAP7D2Q96T17 732 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 PCDH9Q9HC56 1237 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 MCM9Q9NXL9 1143 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 KCNG2Q9UJ96 466 aa5.33□□□□□ -1.56
XRN1-207ENST00000468894 TTC7AQ9ULT0 858 aaPredicted RBP5.33□□□□□ -1.56
XRN1-207ENST00000468894 HNRNPCL2B2RXH8 293 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 PRAC2D3DTV9 90 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 CLGNO14967 610 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 MBD4O95243 580 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 BDKRB2P30411 391 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 NLRP5P59047 1200 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 RPS3AP61247 264 aaKnown RBP5.32□□□□□ -1.56
XRN1-207ENST00000468894 CSTF3Q12996 717 aaKnown RBP5.32□□□□□ -1.56
XRN1-207ENST00000468894 CDONQ4KMG0 1287 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 FAM76BQ5HYJ3 339 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 RGMBQ6NW40 437 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 KRBA2Q6ZNG9 492 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 ODF3L1Q8IXM7 274 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 DUSP19Q8WTR2 217 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 FIG4Q92562 907 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 SMARCE1Q969G3 411 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 IGSF8Q969P0 613 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 GRAMD2BQ96HH9 432 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 ACOX2Q99424 681 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 PDCL3Q9H2J4 239 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 SLC28A3Q9HAS3 691 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 SEBOXQ9HB31 216 aaPredicted RBP5.32□□□□□ -1.56
XRN1-207ENST00000468894 FBRSL1Q9HCM7 1045 aaKnown RBP5.32□□□□□ -1.56
XRN1-207ENST00000468894 LIMA1Q9UHB6 759 aaKnown RBP5.32□□□□□ -1.56
XRN1-207ENST00000468894 VDAC3Q9Y277 283 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 ADAM18Q9Y3Q7 739 aa5.32□□□□□ -1.56
XRN1-207ENST00000468894 IGHV4OR15-8A0A075B7B6 117 aa5.31□□□□□ -1.56
XRN1-207ENST00000468894 A0A0G2JPF8 293 aa5.31□□□□□ -1.56
XRN1-207ENST00000468894 GOLGA6L9A6NEM1 432 aa5.31□□□□□ -1.56
XRN1-207ENST00000468894 HNRNPCL3B7ZW38 293 aa5.31□□□□□ -1.56
XRN1-207ENST00000468894 EPB41L2O43491 1005 aaKnown RBP5.31□□□□□ -1.56
XRN1-207ENST00000468894 HNRNPCL1O60812 293 aaKnown RBP5.31□□□□□ -1.56
XRN1-207ENST00000468894 TIPRLO75663 272 aa5.31□□□□□ -1.56
XRN1-207ENST00000468894 HNRNPCL4P0DMR1 293 aa5.31□□□□□ -1.56
XRN1-207ENST00000468894 ZNF182P17025 639 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms