RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 GATA6Q92908 595 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 PPP1R16AQ96I34 528 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 AGAP3Q96P47 875 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.47
CTNS-205ENST00000467663 HEPHQ9BQS7 1158 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 TXLNGYQ9BZA5 131 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 ERVMER34-1Q9H9K5 563 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 PPCSQ9HAB8 311 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 DYRK4Q9NR20 520 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 KLK13Q9UKR3 277 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 APOBEC2Q9Y235 224 aaKnown RBP12.12□□□□□ -0.47
CTNS-205ENST00000467663 BTBD3Q9Y2F9 522 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
CTNS-205ENST00000467663 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 PLXNA2O75051 1894 aa12.12□□□□□ -0.47
CTNS-205ENST00000467663 MAGEB16A2A368 324 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 PRAMEF26H0Y7S4 382 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 J3KR12 359 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 MAP2K7O14733 419 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 YKT6O15498 198 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 MAGEC1O60732 1142 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 RNGTTO60942 597 aaKnown RBP12.11□□□□□ -0.47
CTNS-205ENST00000467663 DKK1O94907 266 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 EPOP01588 193 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 CA4P22748 312 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 PSMB4P28070 264 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 TNNT3P45378 269 aaPredicted RBP12.11□□□□□ -0.47
CTNS-205ENST00000467663 RXRGP48443 463 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 CSNK1DP48730 415 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 CCNHP51946 323 aaPredicted RBP12.11□□□□□ -0.47
CTNS-205ENST00000467663 PMS2P54278 862 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 STAT4Q14765 748 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 PRAMEF14Q5SWL7 426 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 KCTD11Q693B1 232 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 PRUNE1Q86TP1 453 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
CTNS-205ENST00000467663 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
CTNS-205ENST00000467663 GRIN3AQ8TCU5 1115 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 VOPP1Q96AW1 172 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 IMP4Q96G21 291 aaKnown RBP12.11□□□□□ -0.47
CTNS-205ENST00000467663 LRIG1Q96JA1 1093 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 MGME1Q9BQP7 344 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
CTNS-205ENST00000467663 FUT8Q9BYC5 575 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 TOR4AQ9NXH8 423 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 FAM153AQ9UHL3 310 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 ACTL7AQ9Y615 435 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 ANKRD36A6QL64 1941 aa12.11□□□□□ -0.47
CTNS-205ENST00000467663 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
CTNS-205ENST00000467663 A0A1W2PQU0 124 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 TMEM8BA6NDV4 472 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 TNFSF14O43557 240 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 TTC4O95801 387 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 GSRP00390 522 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 HLA-DQB2P05538 268 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 ABHD2P08910 425 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 NFKB1P19838 968 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 ITGB7P26010 798 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 CD68P34810 354 aaPredicted RBP12.1□□□□□ -0.47
CTNS-205ENST00000467663 MAGEA3P43357 314 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 NPY2RP49146 381 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 NEK3P51956 506 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 IL9RQ01113 521 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 SLC10A7Q0GE19 358 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 LAMB3Q13751 1172 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 GRM3Q14832 879 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 ZNF284Q2VY69 593 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 CCDC38Q502W7 563 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 B4GALNT4Q76KP1 1039 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 HORMAD1Q86X24 394 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 OXR1Q8N573 874 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
CTNS-205ENST00000467663 PNPLA1Q8N8W4 532 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 TMEM145Q8NBT3 493 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 OR2AP1Q8NGE2 309 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 SAP25Q8TEE9 199 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 SERPINB12Q96P63 405 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 CCDC77Q9BR77 488 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
CTNS-205ENST00000467663 HECAQ9UBI9 543 aaPredicted RBP12.1□□□□□ -0.47
CTNS-205ENST00000467663 ZFR2Q9UPR6 939 aaKnown RBP12.1□□□□□ -0.47
CTNS-205ENST00000467663 KMT2BQ9UMN6 2715 aaPredicted RBP12.1□□□□□ -0.47
CTNS-205ENST00000467663 CABIN1Q9Y6J0 2220 aa12.09□□□□□ -0.47
CTNS-205ENST00000467663 A0A1W2PQ67 120 aa12.09□□□□□ -0.47
CTNS-205ENST00000467663 SDR42E2A6NKP2 422 aa12.09□□□□□ -0.47
CTNS-205ENST00000467663 AP1G1O43747 822 aa12.09□□□□□ -0.47
CTNS-205ENST00000467663 TMEM63AO94886 807 aa12.09□□□□□ -0.47
CTNS-205ENST00000467663 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
CTNS-205ENST00000467663 NUDT17P0C025 328 aa12.09□□□□□ -0.47
CTNS-205ENST00000467663 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
CTNS-205ENST00000467663 ADRB3P13945 408 aa12.09□□□□□ -0.47
CTNS-205ENST00000467663 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
CTNS-205ENST00000467663 PHBP35232 272 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms