RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC26A3P40879 764 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 YAP1P46937 504 aaKnown RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 IREB2P48200 963 aaKnown RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 PLCL1Q15111 1095 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 ZNF678Q5SXM1 525 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 TMCO5AQ8N6Q1 288 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 EFHD2Q96C19 240 aaPredicted RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 PHF21BQ96EK2 531 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 ZMAT2Q96NC0 199 aaKnown RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 ALPK1Q96QP1 1244 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 WDR6Q9NNW5 1121 aaKnown RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 C16orf96A6NNT2 1141 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 FGF4P08620 206 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 LMO2P25791 158 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 AXLP30530 894 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 BFSP2Q13515 415 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 FBXO47Q5MNV8 452 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 C9orf57Q5W0N0 161 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 CHST15Q7LFX5 561 aaPredicted RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 TFAP2DQ7Z6R9 452 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 DCP1BQ8IZD4 617 aaKnown RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 ABHD11Q8NFV4 315 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 SH3YL1Q96HL8 342 aaPredicted RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 C3orf30Q96M34 536 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 FCRL5Q96RD9 977 aa19.74■□□□□ 0.75
SDF4-205ENST00000465727 SDR39U1Q9NRG7 319 aaPredicted RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 NUP205Q92621 2012 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 AQP9O43315 295 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 SUPT7LO94864 414 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 PLK1P53350 603 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 LAMC2Q13753 1193 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 SKIV2LQ15477 1246 aaKnown RBP19.73■□□□□ 0.75
SDF4-205ENST00000465727 ZNF618Q5T7W0 954 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 NEPROQ6NW34 567 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 RPS27LQ71UM5 84 aaKnown RBP19.73■□□□□ 0.75
SDF4-205ENST00000465727 RNF135Q8IUD6 432 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 BPIFB6Q8NFQ5 453 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 S100ZQ8WXG8 99 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 TMEM125Q96AQ2 219 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 PGAP3Q96FM1 320 aaPredicted RBP19.73■□□□□ 0.75
SDF4-205ENST00000465727 KCTD14Q9BQ13 255 aaPredicted RBP19.73■□□□□ 0.75
SDF4-205ENST00000465727 LHPPQ9H008 270 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 ING2Q9H160 280 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 ENTPD7Q9NQZ7 604 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 GDAP2Q9NXN4 497 aa19.73■□□□□ 0.75
SDF4-205ENST00000465727 DICER1Q9UPY3 1922 aaKnown RBP19.73■□□□□ 0.75
SDF4-205ENST00000465727 MT-CO1P00395 513 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 TKTP29401 623 aaKnown RBP19.72■□□□□ 0.75
SDF4-205ENST00000465727 EEF1DP29692 281 aaKnown RBP19.72■□□□□ 0.75
SDF4-205ENST00000465727 GSK3BP49841 420 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 EEFSECP57772 596 aaKnown RBP19.72■□□□□ 0.75
SDF4-205ENST00000465727 CAPRIN1Q14444 709 aaKnown RBP19.72■□□□□ 0.75
SDF4-205ENST00000465727 RBM20Q5T481 1227 aaKnown RBP19.72■□□□□ 0.75
SDF4-205ENST00000465727 DENND5AQ6IQ26 1287 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 OTOP3Q7RTS5 596 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 MUS81Q96NY9 551 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 PPP1R16BQ96T49 567 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 HPS4Q9NQG7 708 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 TSC22D4Q9Y3Q8 395 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 MYLKQ15746 1914 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 ZNF236Q9UL36 1845 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 UBXN8O00124 270 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 SYNCRIPO60506 623 aaKnown RBP19.72■□□□□ 0.75
SDF4-205ENST00000465727 GSTT2P0CG29 244 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 GSTT2BP0CG30 244 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 INSRRP14616 1297 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 NPR3P17342 541 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 ALDH3A2P51648 485 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 GEMP55040 296 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 GABARAPL2P60520 117 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 HERVK_113P63132 956 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 CRY1Q16526 586 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 TAF2Q6P1X5 1199 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 BLOC1S3Q6QNY0 202 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 ARMCX2Q7L311 632 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 GALNT7Q86SF2 657 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 PROSER1Q86XN7 944 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 PARP8Q8N3A8 854 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 ZNF560Q96MR9 790 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 RDH12Q96NR8 316 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 ERVK-6Q9BXR3 956 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 DNAJC15Q9Y5T4 150 aa19.72■□□□□ 0.75
SDF4-205ENST00000465727 TNPO2O14787 897 aaKnown RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 EGFRP00533 1210 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 VTNP04004 478 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 UGT2B4P06133 528 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 CRHBPP24387 322 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 ELK4P28324 431 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 IDUAP35475 653 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 OPRL1P41146 370 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 PNPLA4P41247 253 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 LEPRP48357 1165 aaKnown RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 PLA2G16P53816 162 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 MLLT10P55197 1068 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 THAP5Q7Z6K1 395 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 APPL2Q8NEU8 664 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 IPMKQ8NFU5 416 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 HDAC2Q92769 488 aaKnown RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 CSF3RQ99062 836 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 SLC30A3Q99726 388 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms