RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LYSMD3Q7Z3D4 306 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 PDCD7Q8N8D1 485 aaKnown RBP16.93■□□□□ 0.3
USP39-211ENST00000465282 GLIS1Q8NBF1 620 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 BRSK1Q8TDC3 778 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 TUBB2BQ9BVA1 445 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 SMOC1Q9H4F8 434 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 GDF3Q9NR23 364 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 GPR27Q9NS67 375 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP39-211ENST00000465282 NFKBIL1Q9UBC1 381 aaPredicted RBP16.93■□□□□ 0.3
USP39-211ENST00000465282 SCN8AQ9UQD0 1980 aa16.93■□□□□ 0.3
USP39-211ENST00000465282 A0A1B0GVT2 93 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 ECEL1O95672 775 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 APRTP07741 180 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 C1SP09871 688 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 ZSCAN5DPP0CG00 497 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 THEGLP0DJG4 465 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 TRIM23P36406 574 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 ETV3P41162 512 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 CHRNA4P43681 627 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 CLDN2P57739 230 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 NXPH1P58417 271 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 DCDC1P59894 354 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 PTPRRQ15256 657 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 IRF4Q15306 451 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 KIF19Q2TAC6 998 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 AASDHQ4L235 1098 aaPredicted RBP16.92■□□□□ 0.3
USP39-211ENST00000465282 FAXCQ5TGI0 409 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 DENND5AQ6IQ26 1287 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 PNCKQ6P2M8 343 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 Q6ZSR6 202 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 SYDE1Q6ZW31 735 aaPredicted RBP16.92■□□□□ 0.3
USP39-211ENST00000465282 ALYREFQ86V81 257 aaKnown RBP16.92■□□□□ 0.3
USP39-211ENST00000465282 SMIM14Q96QK8 99 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 MYOCQ99972 504 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 MBNL1Q9NR56 388 aaKnown RBP16.92■□□□□ 0.3
USP39-211ENST00000465282 NEU2Q9Y3R4 380 aa16.92■□□□□ 0.3
USP39-211ENST00000465282 C2orf81A6NN90 581 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 PDE2AO00408 941 aaPredicted RBP16.91■□□□□ 0.3
USP39-211ENST00000465282 YKT6O15498 198 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 CRTAMO95727 393 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 PIRTP0C851 137 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 ZNF883P0CG24 379 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 LIMK1P53667 647 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 BNC1Q01954 994 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 CDH17Q12864 832 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 LAMB3Q13751 1172 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 INPP5AQ14642 412 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 PPP1R7Q15435 360 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 TAF1AQ15573 450 aaPredicted RBP16.91■□□□□ 0.3
USP39-211ENST00000465282 ZNF423Q2M1K9 1284 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 TCEAL6Q6IPX3 200 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 GLT6D1Q7Z4J2 308 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 PTAR1Q7Z6K3 402 aaPredicted RBP16.91■□□□□ 0.3
USP39-211ENST00000465282 OR13H1Q8NG92 308 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 DTX3LQ8TDB6 740 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 BLOC1S5Q8TDH9 187 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 TCEAL3Q969E4 200 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 AP2M1Q96CW1 435 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 EDEM2Q9BV94 578 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 DDX47Q9H0S4 455 aaKnown RBP16.91■□□□□ 0.3
USP39-211ENST00000465282 ABCG8Q9H221 673 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 FAM83DQ9H4H8 585 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 TMEM9BQ9NQ34 198 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 SHOC2Q9UQ13 582 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 SPO11Q9Y5K1 396 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 SNX11Q9Y5W9 270 aa16.91■□□□□ 0.3
USP39-211ENST00000465282 SPTY2D1-AS1A0A0U1RR47 76 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 H0Y8X5 98 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 USP12O75317 370 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 TPSB2P20231 275 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 SDHBP21912 280 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 KELP23276 732 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 HTR1BP28222 390 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 MAGEA6P43360 314 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 RXRGP48443 463 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 THOP1P52888 689 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 BASP1P80723 227 aaKnown RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 SARNPP82979 210 aaKnown RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 CKAP4Q07065 602 aaKnown RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 GPS1Q13098 491 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 SLC14A1Q13336 389 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 MSLNQ13421 630 aaPredicted RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 DHX34Q14147 1143 aaKnown RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 TPSAB1Q15661 275 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 HLA-BQ31612 363 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 PDPK2PQ6A1A2 396 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 ZNF572Q7Z3I7 529 aaPredicted RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 PRUNE1Q86TP1 453 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 TTC30BQ8N4P2 665 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 EID2BQ96D98 161 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 PLEKHG4BQ96PX9 1271 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 APOL2Q9BQE5 337 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 APOOQ9BUR5 198 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 DNAAF2Q9NVR5 837 aaKnown RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 CDC23Q9UJX2 597 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 CA5BQ9Y2D0 317 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 PKP3Q9Y446 797 aa16.9■□□□□ 0.3
USP39-211ENST00000465282 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms