RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CD97P48960 835 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 TPI1P60174 286 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 RPS21P63220 83 aaKnown RBP11.22□□□□□ -0.61
SSR3-202ENST00000463503 CCL7P80098 99 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 C1orf61Q13536 156 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 KRT81Q14533 505 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 PAPD7Q5XG87 772 aaKnown RBP11.22□□□□□ -0.61
SSR3-202ENST00000463503 PHACTR4Q8IZ21 702 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 SDR16C5Q8N3Y7 309 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 LZTR1Q8N653 840 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 ARL10Q8N8L6 244 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 RTL3Q8N8U3 475 aaKnown RBP11.22□□□□□ -0.61
SSR3-202ENST00000463503 ZSCAN1Q8NBB4 408 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 BTN2A2Q8WVV5 523 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 RAPGEF5Q92565 580 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 GLMNQ92990 594 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 MIB2Q96AX9 1013 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 RPRD1AQ96P16 312 aaPredicted RBP11.22□□□□□ -0.61
SSR3-202ENST00000463503 LENG8Q96PV6 779 aaPredicted RBP11.22□□□□□ -0.61
SSR3-202ENST00000463503 CSPG4P5Q96PW8 444 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 RNF157Q96PX1 679 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 MAGEB5Q9BZ81 275 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 CPEB1Q9BZB8 566 aaKnown RBP11.22□□□□□ -0.61
SSR3-202ENST00000463503 GPATCH2LQ9NWQ4 482 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 SPASTQ9UBP0 616 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 PLEKHB1Q9UF11 243 aaPredicted RBP11.22□□□□□ -0.61
SSR3-202ENST00000463503 ANAPC2Q9UJX6 822 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 VPS28Q9UK41 221 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 FADS3Q9Y5Q0 445 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 WASF2Q9Y6W5 498 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 POLQO75417 2590 aa11.22□□□□□ -0.61
SSR3-202ENST00000463503 TNRC6AQ8NDV7 1962 aaKnown RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 hCG_1818297A0A087WSY0 165 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 LRRD1A4D1F6 860 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 CREB3O43889 395 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 SNAP91O60641 907 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 ZNF821O75541 412 aaPredicted RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 LEFTY1O75610 366 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 PRNPP04156 253 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 KRT1P04264 644 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 CD48P09326 243 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 TSHRP16473 764 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 ZFXP17010 805 aaPredicted RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 ERCC2P18074 760 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 EPHB2P29323 1055 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 MARCKSL1P49006 195 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 ARSDP51689 593 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 NEK3P51956 506 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 YBEYP58557 167 aaPredicted RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 GNG11P61952 73 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 ZFP36L1Q07352 338 aaKnown RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 PAFAH1B3Q15102 231 aaKnown RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 ALFQ53S48 1182 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 ANKRD20A8PQ5CZ79 823 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 ARSIQ5FYB1 569 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 PPP6R3Q5H9R7 873 aaPredicted RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 SLC9A4Q6AI14 798 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 C22orf39Q6P5X5 142 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 MFSD7Q6UXD7 560 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 SPOCD1Q6ZMY3 1216 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 PARS2Q7L3T8 475 aaKnown RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 TMPRSS9Q7Z410 1059 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 UMODL1-AS1Q8N2C9 162 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 PCDH19Q8TAB3 1148 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 PBKQ96KB5 322 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 DYRK4Q9NR20 520 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 PACSIN2Q9UNF0 486 aaPredicted RBP11.21□□□□□ -0.61
SSR3-202ENST00000463503 SNX10Q9Y5X0 201 aa11.21□□□□□ -0.61
SSR3-202ENST00000463503 ESPL1Q14674 2120 aa11.21□□□□□ -0.62
SSR3-202ENST00000463503 PDZD2O15018 2839 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 ILVBLA1L0T0 632 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 TMX2-CTNND1H3BSU7 103 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 FPGTO14772 594 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 AP1G1O43747 822 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 SRGAP2O75044 1071 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 CNTN5O94779 1100 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 ANXA6P08133 673 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 PYGMP11217 842 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 TCP1P17987 556 aaKnown RBP11.2□□□□□ -0.62
SSR3-202ENST00000463503 ITGB7P26010 798 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 CD82P27701 267 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 SERPINB6P35237 376 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 IGFALSP35858 605 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 ETFBP38117 255 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 GGCXP38435 758 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 NDST2P52849 883 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 CCDC15Q0P6D6 951 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 TFDP2Q14188 446 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 ODF2Q5BJF6 829 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 AFMIDQ63HM1 303 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 ESRP1Q6NXG1 681 aaKnown RBP11.2□□□□□ -0.62
SSR3-202ENST00000463503 LRRC49Q8IUZ0 686 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 SLITRK4Q8IW52 837 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 C17orf53Q8N3J3 647 aaPredicted RBP11.2□□□□□ -0.62
SSR3-202ENST00000463503 RASGEF1CQ8N431 466 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 DENND6BQ8NEG7 585 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 USP7Q93009 1102 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 VOPP1Q96AW1 172 aa11.2□□□□□ -0.62
SSR3-202ENST00000463503 TMEM74Q96NL1 305 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms