RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FMO4P31512 558 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 MC4RP32245 332 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 PFKPQ01813 784 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 KDSRQ06136 332 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 PLEKHG6Q3KR16 790 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 MPPE1Q53F39 396 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 DGKKQ5KSL6 1271 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 AGAP9Q5VTM2 703 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 FAM45BPQ6NSW5 357 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 TRIM67Q6ZTA4 783 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 ISCA2Q86U28 154 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 FAM45AQ8TCE6 357 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 NAT14Q8WUY8 206 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 SREK1Q8WXA9 508 aaKnown RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 MYLIPQ8WY64 445 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 LPGAT1Q92604 370 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 PHF21BQ96EK2 531 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 CCDC97Q96F63 343 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 LMLNQ96KR4 655 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 AARSD1Q9BTE6 412 aaKnown RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 WDR55Q9H6Y2 383 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 TNFRSF12AQ9NP84 129 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 ABCB8Q9NUT2 735 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 TAS2R1Q9NYW7 299 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 ARHGAP26Q9UNA1 814 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 APOBEC2Q9Y235 224 aaKnown RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 FAM50BQ9Y247 325 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 GOLGA8QA0A0J9YX86 632 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 GOLGA8OA6NCC3 632 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 GOLGA8NF8WBI6 632 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 GRM6O15303 877 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 GRID2O43424 1007 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 CCDC22O60826 627 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 H2AFYO75367 372 aaKnown RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 RHOP08100 348 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 ESRRAP11474 423 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 PSMA3P25788 255 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 AFTPHQ6ULP2 937 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 LYSMD3Q7Z3D4 306 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 SDCCAG8Q86SQ7 713 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 ZSWIM9Q86XI8 627 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 FAM13CQ8NE31 585 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 FIBINQ8TAL6 211 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 PIH1D2Q8WWB5 315 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 ZSWIM3Q96MP5 696 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 ILKAPQ9H0C8 392 aaPredicted RBP12.8□□□□□ -0.36
VAPB-203ENST00000463370 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 RAP2CQ9Y3L5 183 aa12.8□□□□□ -0.36
VAPB-203ENST00000463370 E9PBE3 544 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 MATN2O00339 956 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 PER2O15055 1255 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 KLHL41O60662 606 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 PGLSO95336 258 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 GM2AP17900 193 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 ATP5F1P24539 256 aaPredicted RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 CA5AP35218 305 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 RASSF2P50749 326 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 SEMG2Q02383 582 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 ACAP2Q15057 778 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 EML3Q32P44 896 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 MPP7Q5T2T1 576 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 RETSATQ6NUM9 610 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 PHTF2Q8N3S3 785 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 RYBPQ8N488 228 aaPredicted RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 BIRC8Q96P09 236 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 SLC30A3Q99726 388 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 BTBD10Q9BSF8 475 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 LINC00597Q9H2U6 94 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 IKZF3Q9UKT9 509 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 ZNF510Q9Y2H8 683 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 SPTBN5Q9NRC6 3674 aaKnown RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 GRXCR1A8MXD5 290 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 NEMP1O14524 444 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 STX7O15400 261 aaKnown RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 CD1DP15813 335 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 ZNF37AP17032 561 aaPredicted RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 EPHA3P29320 983 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 RPL14P50914 215 aaKnown RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 SUOXP51687 545 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 EPHA5P54756 1037 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 EPHB1P54762 984 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 SNCBQ16143 134 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 FUT11Q495W5 492 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 FAM109BQ6ICB4 259 aaPredicted RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 ACDQ96AP0 544 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 MYO19Q96H55 970 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 NUF2Q9BZD4 464 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 STN1Q9H668 368 aaKnown RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 KIAA1522Q9P206 1035 aaPredicted RBP12.79□□□□□ -0.36
VAPB-203ENST00000463370 LZTS1Q9Y250 596 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 ZNF711Q9Y462 761 aa12.79□□□□□ -0.36
VAPB-203ENST00000463370 MEI4A8MW99 385 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 A8MX80 341 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 TRIM24O15164 1050 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 GSC2O15499 205 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 ARSAP15289 507 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 PRKAA2P54646 552 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms