RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 EBAG9O00559 213 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 DHRS4L1P0CG22 281 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 TCEA1P23193 301 aaKnown RBP4.3□□□□□ -1.72
UBA3-204ENST00000461522 SSTR2P30874 369 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 LIFRP42702 1097 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 DDR1Q08345 913 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 ZRSR2Q15696 482 aaKnown RBP4.3□□□□□ -1.72
UBA3-204ENST00000461522 TOM1L2Q6ZVM7 507 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 SFTPA2Q8IWL1 248 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 TMEM57Q8N5G2 664 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 ANKRD44Q8N8A2 993 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 DNAAF1Q8NEP3 725 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 SPATA20Q8TB22 786 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 HSPH1Q92598 858 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 ZNF385AQ96PM9 386 aaKnown RBP4.3□□□□□ -1.72
UBA3-204ENST00000461522 SPRY4Q9C004 299 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 TCF7L2Q9NQB0 619 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 RASSF1Q9NS23 344 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 MAP3K20Q9NYL2 800 aaKnown RBP4.3□□□□□ -1.72
UBA3-204ENST00000461522 DNAJC16Q9Y2G8 782 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 PAM16Q9Y3D7 125 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 SCINQ9Y6U3 715 aa4.3□□□□□ -1.72
UBA3-204ENST00000461522 PHRF1Q9P1Y6 1649 aaKnown RBP4.3□□□□□ -1.72
UBA3-204ENST00000461522 COL5A2P05997 1499 aaPredicted RBP4.3□□□□□ -1.72
UBA3-204ENST00000461522 RGPD8O14715 1765 aaPredicted RBP4.3□□□□□ -1.72
UBA3-204ENST00000461522 ATRNO75882 1429 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 PIK3C2AO00443 1686 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 CAMTA1Q9Y6Y1 1673 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 ERVV-2B6SEH9 535 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 B9A039 149 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 GAGE7O76087 117 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 CHRM4P08173 479 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 HSP90AB1P08238 724 aaKnown RBP4.29□□□□□ -1.72
UBA3-204ENST00000461522 GAGE12FP0CL80 117 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 GAGE12GP0CL81 117 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 GAGE12IP0CL82 117 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 CD53P19397 219 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 CHKAP35790 457 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 TNNT2P45379 298 aaPredicted RBP4.29□□□□□ -1.72
UBA3-204ENST00000461522 CXCR3P49682 368 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 GAGE1Q13065 139 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 GAGE4Q13068 117 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 PRKG1Q13976 671 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 CALCRLQ16602 461 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 DSTYKQ6XUX3 929 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 MOGAT3Q86VF5 341 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 EXOC3L1Q86VI1 746 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 FOXP4Q8IVH2 680 aaPredicted RBP4.29□□□□□ -1.72
UBA3-204ENST00000461522 POC1AQ8NBT0 407 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 C1orf131Q8NDD1 294 aaKnown RBP4.29□□□□□ -1.72
UBA3-204ENST00000461522 ARRDC2Q8TBH0 407 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 SPPL3Q8TCT6 385 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 AFG1LQ8WV93 481 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 SORCS1Q8WY21 1168 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 RILPL2Q969X0 211 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 PLEKHF1Q96S99 279 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 CLSTN3Q9BQT9 956 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 MMTAG2Q9BU76 263 aaKnown RBP4.29□□□□□ -1.72
UBA3-204ENST00000461522 SDF2L1Q9HCN8 221 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 BABAM1Q9NWV8 329 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 NDRG3Q9UGV2 375 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 WDR81Q562E7 1941 aa4.29□□□□□ -1.72
UBA3-204ENST00000461522 LRP6O75581 1613 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 CBY3A6NI87 242 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 WNT9BO14905 357 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 PMS2P2O95744 297 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 SP1P08047 785 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 RYKP34925 604 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 ECT2LQ008S8 904 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 DHX8Q14562 1220 aaKnown RBP4.28□□□□□ -1.72
UBA3-204ENST00000461522 WDR43Q15061 677 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBA3-204ENST00000461522 OTUD3Q5T2D3 398 aaPredicted RBP4.28□□□□□ -1.72
UBA3-204ENST00000461522 IL20RBQ6UXL0 311 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 PRSS45Q7RTY3 260 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 MYCT1Q8N699 235 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 GDPD5Q8WTR4 605 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 RAB40AQ8WXH6 277 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 ANP32BQ92688 251 aaKnown RBP4.28□□□□□ -1.72
UBA3-204ENST00000461522 SH3KBP1Q96B97 665 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 TRIM44Q96DX7 344 aaPredicted RBP4.28□□□□□ -1.72
UBA3-204ENST00000461522 LMAN2LQ9H0V9 348 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 FEM1BQ9UK73 627 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 GDAQ9Y2T3 454 aa4.28□□□□□ -1.72
UBA3-204ENST00000461522 COL14A1Q05707 1796 aaKnown RBP4.27□□□□□ -1.73
UBA3-204ENST00000461522 LMO7Q8WWI1 1683 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 HSPA12AO43301 675 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 TFPIP10646 304 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 VDRP11473 427 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 SRD5A1P18405 259 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 ACSM2AQ08AH3 577 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 ARL16Q0P5N6 197 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 C9orf139Q6ZV77 190 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 SHFQ7M4L6 423 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 CHD1LQ86WJ1 897 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 PAF1Q8N7H5 531 aa4.27□□□□□ -1.73
UBA3-204ENST00000461522 SNRNP27Q8WVK2 155 aaKnown RBP4.27□□□□□ -1.73
UBA3-204ENST00000461522 MPHOSPH6Q99547 160 aaKnown RBP4.27□□□□□ -1.73
UBA3-204ENST00000461522 FAM167BQ9BTA0 163 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms