RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SIX1Q15475 284 aaPredicted RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 CCNG2Q16589 344 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ANKRD20A2Q5SQ80 823 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ANKRD20A1Q5TYW2 823 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ANKRD20A3Q5VUR7 823 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 IL27RAQ6UWB1 636 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ARHGEF18Q6ZSZ5 1173 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ADAT2Q7Z6V5 191 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 MFSD2AQ8NA29 543 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 LPCAT1Q8NF37 534 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 IFT43Q96FT9 208 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 TRIB3Q96RU7 358 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 LYSMD1Q96S90 227 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 CENPHQ9H3R5 247 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 SMOC1Q9H4F8 434 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 C10orf88Q9H8K7 445 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 KCTD5Q9NXV2 234 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 SLCO1B1Q9Y6L6 691 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 A0A1W2PR77 199 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 LNP1A1A4G5 178 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PATE3B3GLJ2 98 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ARHGAP33O14559 1287 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 SLC31A1O15431 190 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 HEXIM1O94992 359 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 NDST3O95803 873 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PRLP01236 227 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PRKCGP05129 697 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ZNF30P17039 623 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ITIH2P19823 946 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 GEMP55040 296 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 C21orf59P57076 290 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ARHGAP8P85298 464 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 FGL2Q14314 439 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 STAT4Q14765 748 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 P3H1Q32P28 736 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 AASDHQ4L235 1098 aaPredicted RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 TCEAL6Q6IPX3 200 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 KDELC1Q6UW63 502 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 LIPIQ6XZB0 460 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 KYAT3Q6YP21 454 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 RAVER1Q8IY67 606 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 FAM71DQ8N9W8 422 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 SPATA22Q8NHS9 363 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 CCHCR1Q8TD31 782 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 C1orf54Q8WWF1 131 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 TCEAL3Q969E4 200 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 LRRC45Q96CN5 670 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PAIP2Q9BPZ3 127 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 TMEM121Q9BTD3 319 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 CPSF2Q9P2I0 782 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 ZNF148Q9UQR1 794 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 AAR2Q9Y312 384 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 HS3ST3A1Q9Y663 406 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 TRPM6Q9BX84 2022 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 NPIPB15A6NHN6 443 aaPredicted RBP11.09□□□□□ -0.63
APTX-209ENST00000460940 ANKRD66B4E2M5 251 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 TOR1BO14657 336 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 LZTS3O60299 673 aaPredicted RBP11.09□□□□□ -0.63
APTX-209ENST00000460940 PMPCBO75439 489 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 MT-CYBP00156 380 aaPredicted RBP11.09□□□□□ -0.63
APTX-209ENST00000460940 ENGP17813 658 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 WNT3AP56704 352 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 IRX4P78413 519 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 GRIK2Q13002 908 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 ARHGEF7Q14155 803 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 CNGA3Q16281 694 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 PCSK7Q16549 785 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 QPCTQ16769 361 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 ABI3BPQ7Z7G0 1075 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 CCDC110Q8TBZ0 833 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 ACTRT1Q8TDG2 376 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 KLK6Q92876 244 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 ARL8AQ96BM9 186 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 RMDN1Q96DB5 314 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 OXNAD1Q96HP4 312 aaPredicted RBP11.09□□□□□ -0.63
APTX-209ENST00000460940 KLF6Q99612 283 aaPredicted RBP11.09□□□□□ -0.63
APTX-209ENST00000460940 MLPHQ9BV36 600 aaPredicted RBP11.09□□□□□ -0.63
APTX-209ENST00000460940 EDEM2Q9BV94 578 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 RABEP2Q9H5N1 569 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.09□□□□□ -0.63
APTX-209ENST00000460940 PCDH15Q96QU1 1955 aa11.09□□□□□ -0.63
APTX-209ENST00000460940 RALGAPA1Q6GYQ0 2036 aa11.08□□□□□ -0.63
APTX-209ENST00000460940 GOLGA6L10A0A0M3HER8 536 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 A0A1B0GVT2 93 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 LOC285095A0A1B0GVY8 99 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 FPGTO14772 594 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 CER1O95813 267 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 PAK4O96013 591 aaPredicted RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 CTPS1P17812 591 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 HLA-DPA1P20036 260 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 LHCGRP22888 699 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 PSMB4P28070 264 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 HNF1BP35680 557 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 MDH1P40925 334 aaKnown RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 CSNK1EP49674 416 aaKnown RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 RPS6KA3P51812 740 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms