RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 POLR3BQ9NW08 1133 aaPredicted RBP18.13■□□□□ 0.49
HPS3-202ENST00000460120 GALPQ9UBC7 116 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 IKZF3Q9UKT9 509 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 PCDHGC4Q9Y5F7 938 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 DNAJC15Q9Y5T4 150 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 SNX13Q9Y5W8 968 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 LOC285095A0A1B0GVY8 99 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 F5H5T6 163 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 CHN2P52757 468 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 STX5Q13190 355 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 VPS26BQ4G0F5 336 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 MRNIPQ6NTE8 343 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 PAQR3Q6TCH7 311 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 DENND1CQ8IV53 801 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 EME1Q96AY2 570 aa18.13■□□□□ 0.49
HPS3-202ENST00000460120 GJB5O95377 273 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 SERPINF2P08697 491 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 ARL1P40616 181 aaPredicted RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 SGSHP51688 502 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 YBX1P67809 324 aaKnown RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 LIN52Q52LA3 116 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 UGT2A3Q6UWM9 527 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 LINGO4Q6UY18 593 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 TEX26Q8N6G2 289 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 PPWD1Q96BP3 646 aaKnown RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 ZNF512Q96ME7 567 aaPredicted RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 TRIM4Q9C037 500 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 GKN1Q9NS71 199 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 IGLV3-10A0A075B6K4 115 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 ZNF839A8K0R7 811 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 CBX4O00257 560 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 SLC22A2O15244 555 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 ADAM12O43184 909 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 CA12O43570 354 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 PRAMEF11O60813 436 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 RPP40O75818 363 aaKnown RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 VNN2O95498 520 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 DNAJB1P25685 340 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 STX1BP61266 288 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 HERVK_113P63132 956 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 LRP8Q14114 963 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 CNPY1Q3B7I2 92 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 HABP4Q5JVS0 413 aaKnown RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 PCSK9Q8NBP7 692 aaKnown RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 LPCAT1Q8NF37 534 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 TUBGCP3Q96CW5 907 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 GLT1D1Q96MS3 346 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 ERVK-6Q9BXR3 956 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 UTP6Q9NYH9 597 aaKnown RBP18.12■□□□□ 0.49
HPS3-202ENST00000460120 EPS15L1Q9UBC2 864 aa18.12■□□□□ 0.49
HPS3-202ENST00000460120 CRCPO75575 148 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CDK14O94921 469 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 PAPSS2O95340 614 aaPredicted RBP18.11■□□□□ 0.49
HPS3-202ENST00000460120 ZNF37AP17032 561 aaPredicted RBP18.11■□□□□ 0.49
HPS3-202ENST00000460120 FDXRP22570 491 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CES1P23141 567 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 EEF1DP29692 281 aaKnown RBP18.11■□□□□ 0.49
HPS3-202ENST00000460120 GSTT1P30711 240 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CASP2P42575 452 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 TSNQ15631 228 aaKnown RBP18.11■□□□□ 0.49
HPS3-202ENST00000460120 PARP15Q460N3 678 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CHSY3Q70JA7 882 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 RNF180Q86T96 592 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 FAR2Q96K12 515 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CINPQ9BW66 212 aaPredicted RBP18.11■□□□□ 0.49
HPS3-202ENST00000460120 EGFL7Q9UHF1 273 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 A0A1B0GTW7 788 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CCDC160A6NGH7 325 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CDC7O00311 574 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 ENPP3O14638 875 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 OR1I1O60431 355 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 NRP2O60462 931 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 TPST1O60507 370 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 SRP72O76094 671 aaKnown RBP18.11■□□□□ 0.49
HPS3-202ENST00000460120 EOMESO95936 686 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 ADSLP30566 484 aaPredicted RBP18.11■□□□□ 0.49
HPS3-202ENST00000460120 SLC11A1P49279 550 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 AGTR2P50052 363 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 MAP7D1Q3KQU3 841 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 GLT6D1Q7Z4J2 308 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 TWIST2Q8WVJ9 160 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 TRAPPC9Q96Q05 1148 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 CENPKQ9BS16 269 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 RNF112Q9ULX5 631 aa18.11■□□□□ 0.49
HPS3-202ENST00000460120 NPEPPSL1A6NEC2 478 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 FAM155AB1AL88 458 aaPredicted RBP18.1■□□□□ 0.49
HPS3-202ENST00000460120 FESP07332 822 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 TRIM25Q14258 630 aaKnown RBP18.1■□□□□ 0.49
HPS3-202ENST00000460120 RETREG3Q86VR2 466 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 FUNDC1Q8IVP5 155 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 DIS3LQ8TF46 1054 aaKnown RBP18.1■□□□□ 0.49
HPS3-202ENST00000460120 CDKN2AIPNLQ96HQ2 116 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 RPL10LQ96L21 214 aaKnown RBP18.1■□□□□ 0.49
HPS3-202ENST00000460120 SLC30A3Q99726 388 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 SPAG4Q9NPE6 437 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 CROTQ9UKG9 612 aa18.1■□□□□ 0.49
HPS3-202ENST00000460120 COL4A4P53420 1690 aaPredicted RBP18.1■□□□□ 0.49
HPS3-202ENST00000460120 PRDX3P30048 256 aaKnown RBP18.1■□□□□ 0.49
HPS3-202ENST00000460120 GNA12Q03113 381 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms