RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GABREP78334 506 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 MSLNQ13421 630 aaPredicted RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 SLC29A2Q14542 456 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 CASP8Q14790 479 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 EFTUD2Q15029 972 aaKnown RBP eCLIP10.36□□□□□ -0.753e-8■■□□□ 13.7
USP39-210ENST00000459775 C9orf64Q5T6V5 341 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 PKN3Q6P5Z2 889 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 ZNF557Q8N988 423 aaPredicted RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 EIF1ADQ8N9N8 165 aaKnown RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 BLOC1S5Q8TDH9 187 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 RMDN1Q96DB5 314 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 MFSD3Q96ES6 412 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 FUT8Q9BYC5 575 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 PHACTR1Q9C0D0 580 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 TMEM245Q9H330 911 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 ARGLU1Q9NWB6 273 aaPredicted RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 SORCS3Q9UPU3 1222 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 E7ESA3 106 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 TRAFD1O14545 582 aaPredicted RBP10.35□□□□□ -0.75
USP39-210ENST00000459775 RIPK2O43353 540 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 PYGLP06737 847 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 EPHX1P07099 455 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 TUBBP07437 444 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 SRFP11831 508 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 NMBRP28336 390 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 NNMTP40261 264 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 KIR2DL1P43626 348 aaPredicted RBP10.35□□□□□ -0.75
USP39-210ENST00000459775 ST8SIA6P61647 398 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 SNRPD1P62314 119 aaKnown RBP10.35□□□□□ -0.75
USP39-210ENST00000459775 SEPT6Q14141 434 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 MAP7D1Q3KQU3 841 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 NAPEPLDQ6IQ20 393 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 KIAA1211LQ6NV74 962 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 TRMT10BQ6PF06 316 aaKnown RBP10.35□□□□□ -0.75
USP39-210ENST00000459775 ASCL5Q7RTU5 278 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 PCDH20Q8N6Y1 951 aaKnown RBP10.35□□□□□ -0.75
USP39-210ENST00000459775 PYROXD1Q8WU10 500 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 KLHL32Q96NJ5 620 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 MMADHCQ9H3L0 296 aaPredicted RBP10.35□□□□□ -0.75
USP39-210ENST00000459775 VPS37BQ9H9H4 285 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 VPS45Q9NRW7 570 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 THAP10Q9P2Z0 257 aaPredicted RBP10.35□□□□□ -0.75
USP39-210ENST00000459775 ARL5AQ9Y689 179 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 STON1Q9Y6Q2 735 aa10.35□□□□□ -0.75
USP39-210ENST00000459775 KRBA1A5PL33 1030 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 SDR42E2A6NKP2 422 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 FOXO6A8MYZ6 492 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 H0Y858 1186 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 ADAM23O75077 832 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 STAMBPO95630 424 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 CPP00450 1065 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 SRPRAP08240 638 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 TMPRSS15P98073 1019 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 CDK16Q00536 496 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 BCL2L1Q07817 233 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 CDH17Q12864 832 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 LAPTM5Q13571 262 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 QPCTQ16769 361 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 HNRNPA1L2Q32P51 320 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 UNC5AQ6ZN44 842 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 Q6ZS52 159 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 C3orf62Q6ZUJ4 267 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 RALGPS2Q86X27 583 aaPredicted RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 FAM3CQ92520 227 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 STAMBPL1Q96FJ0 436 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 FAM129BQ96TA1 746 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 XAB2Q9HCS7 855 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 C2orf42Q9NWW7 574 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 TUBA8Q9NY65 449 aaPredicted RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 IL20Q9NYY1 176 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 ZC3H7BQ9UGR2 993 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 FNDC3AQ9Y2H6 1198 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 SMIM23A6NLE4 172 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 ERI2A8K979 691 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 MYO1CO00159 1063 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 FZD6O60353 706 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 SNX2O60749 519 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 PGLSO95336 258 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 POP4O95707 220 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 TTC4O95801 387 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 NDST3O95803 873 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 ASLP04424 464 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 HNRNPLP14866 589 aaKnown RBP eCLIP10.34□□□□□ -0.75
USP39-210ENST00000459775 EIF2DP41214 584 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 CCT8P50990 548 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 CLCN5P51795 746 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 EIF4HQ15056 248 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 TSPAN33Q86UF1 283 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 MMAAQ8IVH4 418 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 PALM2Q8IXS6 379 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 IL17RCQ8NAC3 791 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 SMYD1Q8NB12 490 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 TXNDC5Q8NBS9 432 aaKnown RBP10.34□□□□□ -0.75
USP39-210ENST00000459775 MDGA1Q8NFP4 955 aa10.34□□□□□ -0.75
USP39-210ENST00000459775 PIH1D2Q8WWB5 315 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms